Job Description P33128 Confidence 100.00% Date Thu Jan 5 11:51:09 GMT 2012 Rank 5 Aligned Residues 187 % Identity 34% Template c1l4iA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:sfae protein; PDBTitle: crystal structure of the periplasmic chaperone sfae Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		D	I	V	I	S	G	T	R	V	I	Y	K	S	D	Q	K	S	V	N	V	R	L	E	N	K	G	N	N	.	P	L	L	V	Q	S	W	L	D	T	G	D	D	N	A	E	P	G	S	I	T	V	P	F	T	A	T	P	P	V	S	R	I	D	A	K	R	G	Q	T	I	K	L	M	Y	T	A	S	T	S	L
Query Conservation																														.
Alig confidence																														.													.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		G	V	A	L	G	A	T	R	V	I	Y	P	E	G	Q	K	Q	V	Q	L	A	V	T	N	N	D	D	K	S	S	Y	L	I	Q	S	W	I	E	N	A	E	.	.	.	.	.	G	K	K	D	A	R	F	V	I	T	P	P	L	F	S	M	Q	G	K	K	E	N	T	L	R	I	I	D	A	T	N	G	Q	M
Template Known Secondary structure						S		S						T	T		S											T	T												T	T	.	.	.	.	.	S		B		S	S					S	S						S	S												T	T		S
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	D	R	E	S	V	F	W	F	N	V	L	E	V	P	P	K	P	D	A	E	K	V	A	N	Q	S	L	L	Q	L	A	F	R	T	R	I	K	L	F	Y	R	P	D	G	L	K	G	N	P	S	E	A	P	L	A	L	K	W	F	W	S	G	S	E	G	K	A	S	L	R	V	T	N	P	T	P	Y	Y
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Sequence		P	E	D	R	E	S	L	F	W	V	N	V	K	A	I	P	A	.	.	.	.	.	.	.	.	.	.	M	D	L	Q	F	A	I	V	S	R	I	K	L	L	Y	R	P	Q	G	L	V	I	P	P	E	Q	A	P	G	K	L	E	F	T	R	E	.	.	.	.	.	.	.	L	T	L	F	N	P	T	P	Y	Y
Template Known Secondary structure			S	S	S														.	.	.	.	.	.	.	.	.	.																		T	T		S	S		G	G	G	S	G	G	G							.	.	.	.	.	.	.							S	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		V	S	F	S	S	G	D	L	E	A	S	G	K	R	Y	P	I	D	V	K	M	I	A	P	F	S	D	E	V	M	K	V	N	G	L	N	G	K	A	N	S	A	K	V	H	F	Y	A	I	N	D	F	G	G	A	I	E	.	G	N	A	R	L
Query Conservation																																																											.
Alig confidence																.	.	.	.															.	.	.	.	.	.	.	.																		.
Template Conservation																.	.	.	.															.	.	.	.	.	.	.	.
Template Sequence		L	T	V	T	D	L	K	A	G	N	K	S	L	E	.	.	.	.	N	T	M	V	P	P	Q	G	K	V	T	V	N	I	.	.	.	.	.	.	.	.	G	G	D	I	T	Y	K	T	I	N	D	Y	G	A	L	T	E	Q	V	R	G	V	V
Template Known Secondary structure										T	T					.	.	.	.						T	T								.	.	.	.	.	.	.	.											T	T	S		B
Template Predicted Secondary structure																.	.	.	.															.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions