Job Description P33128 Confidence 53.73% Date Thu Jan 5 11:51:09 GMT 2012 Rank 47 Aligned Residues 91 % Identity 23% Template c1e42A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:ap-2 complex subunit beta; PDBTitle: beta2-adaptin appendage domain, from clathrin adaptor ap2 Resolution 1.7 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																								.							.	.
Query SS confidence																																																								.							.	.
Query Sequence		D	I	V	I	S	G	T	R	V	I	Y	K	S	D	Q	K	S	V	N	V	R	L	E	N	K	G	N	N	P	L	L	V	Q	S	W	L	D	T	G	D	D	N	A	E	P	G	S	I	T	V	P	F	T	A	.	T	P	P	V	S	R	.	.	I	D	A	K	R	G	Q	T	I	K	L	M	Y	T	A	S	T
Query Conservation																																																								.							.	.
Alig confidence									.																																				.	.	.	.	.	.	.	.				.							.	.
Template Conservation									.																																				.	.	.	.	.	.	.	.
Template Sequence		G	L	E	I	S	G	T	.	F	T	H	R	Q	G	H	I	Y	M	E	M	N	F	T	N	K	A	L	Q	H	M	T	D	F	A	I	Q	F	N	K	N	S	F	G	.	.	.	.	.	.	.	.	V	I	P	S	T	P	L	A	I	H	T	P	L	M	P	N	Q	S	I	D	V	S	L	P	L	N	T	L	G
Template Known Secondary structure		T							.					T	T												S	S	S		B										B	T	T		.	.	.	.	.	.	.	.				S	S						S		B		T	T											S		S
Template Predicted Secondary structure									.																																				.	.	.	.	.	.	.	.
Template SS confidence
		722	.	.	.	.	.	.		.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.									.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	P	K	D	R	E	S	V	F	W	F	N	V	L	E	V	P	P	K	P	D	A	E	K	V	A	N	Q	S	L	L	Q	L	A	F	R	T	R	I	K	L	F	Y
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	K	M	E	P	L	N	N	L	Q	V	A	V	K	N	N	I	D	V	F	Y
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B				S	S	T	T									S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		793																						.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions