 |
Job Description | P13518 | Confidence | 34.55% | Date | Thu Jan 5 11:33:38 GMT 2012 |
Rank | 379 | Aligned Residues | 107 |
% Identity | 12% | Template | d2p10a1 |
SCOP info | TIM beta/alpha-barrel
| Phosphoenolpyruvate/pyruvate domain
| Mll9387-like
|
Resolution | 2.15 |
|
 |
  |   |
493 | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | Q | R | W | L | R | D | T | L | M | Q | C | E | K | S | Q | R | K | R | I | I | I | E | L | A | E | A | D | V | G | Q | H | I | S | R | L | Q | P | V | I | R | L | V | N | A | L | G | V | R | V | A | V | N | Q | A | G | L | T | L | V | S | T | S | W | I | K | E | L | N | V | E | L | L | K | L | H | P | G | L |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |
|
|
|
|   |
|   |
|   |
| . | . |
|
|
|
|
|   |
|   |
|
|   |   |
|   |   | . | . | . |   |   |
|
|   |
|   |   |   |
|
|
| . |
|
|   |
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |
Template Sequence |   |
Q | I | V | V | D | X | A | R | E | V | L | P | V | V | R | H | T | P | . |
. |
V | L | A | G | V | N | G | T | D | P | F | X | V | X | S | . |
. |
. |
T | F | L | R | E | L | K | E | I | G | F | A | . |
G | V | Q | N | F | P | T | V | G | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | D | G | L | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S | S |
| . | . |  |  |  |  |  |
| T | T |
| T | T |
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  | T |
|
| . |  |  |  |  |
| S |
| G | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
573 | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | N | I | E | K | R | T | E | N | Q | L | L | V | Q | S | L | V | E | A | C | S | G | T | S | T | Q | V | Y | A | T | G | V | R | S | R | S | E | W | Q | T | L | I | Q | R | G | V | T |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |
|
|   |   |
|
|
|
|
|
|   |
|
|   |   |   |
|
|
|
|
| . |
|
|
|   |   |   |
|
|   |   |
|   |
|
|
|
|
|
Template Sequence |   |
R | Q | N | L | E | E | T | G | X | S | Y | A | Q | E | V | E | X | I | A | E | A | H | K | L | D | L | L | T | T | P | . |
Y | V | F | S | P | E | D | A | V | A | X | A | K | A | G | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
| . |  |  |
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|