 |
Job Description | P13518 | Confidence | 57.93% | Date | Thu Jan 5 11:33:38 GMT 2012 |
Rank | 300 | Aligned Residues | 86 |
% Identity | 16% | Template | d1x7fa2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Outer surface protein, N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | |
. | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Query Sequence |   |
E | E | N | L | A | I | Q | V | T | V | E | S | L | I | R | P | R | F | Q | R | W | L | R | D | T | L | M | Q | C | E | K | S | Q | R | K | R | I | I | I | E | L | A | E | A | D | V | G | Q | H | I | S | R | L | Q | P | V | I | R | L | V | N | A | L | G | V | R | V | A | V | N | Q | A | G | L | T | L | . |
V | S | T |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   | . |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|   | . | . |   |
|   |   |   |
|
|   |   |
|
|
|
|
|   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |
|   |   |
|
|
Template Sequence |   |
E | R | K | L | G | I | S | L | Y | P | E | H | S | T | K | E | K | D | M | A | Y | I | S | . |
. |
A | A | A | R | H | G | F | S | R | I | F | T | C | L | L | S | V | A | . |
. |
. |
. |
. |
. |
. |
. |
E | F | K | E | I | I | N | H | A | K | D | N | N | M | E | V | I | L | D | V | A | P | A | V | F | Y | S | D | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  | . | . |  |  |  | T | T | T |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T |
|
|
|
|
| T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
556 | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | W | I | K | E | L | N | V | E | L | L | K | L | H | P | G | L |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|
|   |   |
|
|
|
|   |
|
|
Template Sequence |   |
S | F | F | A | E | L | G | A | D | G | I | R | L | D | V | G | F |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
| S |  |  |  |  | S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|