 |
Job Description | P13518 | Confidence | 68.76% | Date | Thu Jan 5 11:33:38 GMT 2012 |
Rank | 266 | Aligned Residues | 98 |
% Identity | 18% | Template | d1qpoa1 |
SCOP info | TIM beta/alpha-barrel
| Nicotinate/Quinolinate PRTase C-terminal domain-like
| NadC C-terminal domain-like
|
Resolution | 2.40 |
|
 |
  |   |
529 | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | P | V | I | R | L | V | N | A | L | G | V | R | V | A | V | N | Q | A | G | L | T | L | V | S | T | S | W | I | K | E | L | N | V | E | L | L | K | L | H | P | G | L | V | R | N | I | E | K | R | T | E | N | Q | L | L | V | Q | S | L | V | E | A | C | S | G | T | S | T | Q | V | Y | A | T | G | V | R | S | R |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |
Template Sequence |   |
V | V | D | A | L | R | A | V | R | N | A | A | P | D | L | P | C | E | V | E | V | D | S | L | E | Q | L | D | A | V | L | P | E | K | P | E | L | I | L | L | D | N | F | A | V | W | Q | T | Q | T | A | V | Q | . |
. |
. |
. |
. |
. |
. |
. |
R | R | D | S | R | A | P | T | V | M | L | E | S | S | G | G | L | S | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  | G | G | G |
|
| S |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |
| T | T |
|  |  |  |  |  | S | S |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
  |   |
609 | 610 | . | . | . | . | . | . | . | . | . | 620 | |
. | . | . | . | . | . | . | . | . | 630 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | W | Q | T | L | I | Q | R | G | V | T | . |
G | G | Q | G | D | F | F | A | S | S | Q | P | L | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   | . |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
Q | T | A | A | T | Y | A | E | T | G | V | D | Y | L | A | V | G | A | L | T | H | S | V | R | V | L | D |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  | T | T |
| S |  |  |  |
| G | G | G | T | S | S |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|