Return to main results Retrieve Phyre Job Id

Job DescriptionP13518
Confidence70.26%DateThu Jan 5 11:33:38 GMT 2012
Rank258Aligned Residues78
% Identity12%Templated1lwha2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   512.......520.... .....530.........540..... ....550.........560.........570........
Predicted Secondary structure 

.......



......













Query SS confidence 












. . . . . . .




















. . . . . .
































Query Sequence  RIIIELAEADVGQ. . . . . . . HISRLQPVIRLVNALGVRVAV. . . . . . NQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK
Query Conservation   
  

 
     .......           
   
    
......



        
  
  
 



   
     
Alig confidence 












.......




















......







........










......
Template Conservation   
 
 
    
 
      

  

  




  


  
 
 

       

 ........  
   

   ......
Template Sequence  MIGYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYD. . . . . . . . VVDFYSFKAEY. . . . . .
Template Known Secondary structure 


GGGT

SSSSSS

TTT
S



SSSS

S........
S
GGG......
Template Predicted Secondary structure 































........










......
Template SS confidence 















































































   1........10.........20.........30.........40.........50..... ....60......
 
   579580.........590.........600.....
Predicted Secondary structure 





Query SS confidence 


























Query Sequence  RTENQLLVQSLVEACSGTSTQVYATGV
Query Conservation                       





Alig confidence  ..
























Template Conservation  ..

  


 

   
  

 



 
Template Sequence  . . GSEREFKEMIEAFHDSGIKVVLDLP
Template Known Secondary structure  ..

TT

Template Predicted Secondary structure  ..




Template SS confidence 


























   67..70.........80.........90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions