Return to main results Retrieve Phyre Job Id

Job DescriptionP13518
Confidence88.84%DateThu Jan 5 11:33:38 GMT 2012
Rank111Aligned Residues74
% Identity16%Templated1gjwa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540..... ....550.........560.........570.........580.........590
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Query Sequence  QHISRLQPVIRLVNALGVRVAV. . . . . . . . . . . . . NQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLV
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Template Sequence  GTFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVK. . . . . . . . NPMELDERYHDPLLEPFKVDEEFKAFV
Template Known Secondary structure 

TT






SS
SSSS

TTS........
GGGS
GGGTTS
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   117..120.........130.........140.........150.........160. ........170.........180........
 
   591........600.....
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Query Sequence  EACSGTSTQVYATGV
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Template Sequence  EACHILGIRVILDFI
Template Known Secondary structure  TT

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   189190.........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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