Job Description P13518 Confidence 100.00% Date Thu Jan 5 11:33:38 GMT 2012 Rank 5 Aligned Residues 243 % Identity 19% Template c3s83A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef family protein; PDBTitle: crystal structure of eal domain from caulobacter crescentus cb15 Resolution 1.34 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																									.																				.
Query SS confidence																									.																				.
Query Sequence		W	R	T	L	I	E	Q	M	L	S	R	G	G	P	R	L	Y	Q	K	P	A	V	T	.	R	E	G	Q	V	H	H	R	E	L	M	C	R	I	F	D	G	N	E	.	E	V	S	S	A	E	Y	M	P	M	V	L	Q	F	G	L	S	E	E	Y	D	R	L	Q	I	S	R	L	I	P	L	L	R	Y	W	P
Query Conservation																									.																				.
Alig confidence																									.																				.
Template Conservation
Template Sequence		L	E	A	D	L	R	G	A	I	G	R	G	E	I	T	P	Y	F	Q	P	I	V	R	L	S	T	G	A	L	S	G	F	E	A	L	A	R	W	I	H	P	R	R	G	X	L	P	P	D	E	F	L	P	L	I	E	E	X	G	L	X	S	E	L	G	A	H	X	X	H	A	A	A	Q	Q	L	S	T	W	R
Template Known Secondary structure													T	S											T	T	T															T	T	T					G	G	G	T							T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		477	.								.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		E	E	.	.	.	.	.	.	.	N	L	A	I	Q	V	T	V	E	S	L	I	R	P	R	F	Q	R	W	L	R	D	T	L	M	Q	C	E	K	S	Q	R	K	R	I	I	I	E	L	A	E	A	D	V	G	Q	H	I	S	R	L	Q	P	V	I	R	L	V	N	A	L	G	V	R	V	A	V	N	Q	A	G
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																						.
Template Conservation																																.
Template Sequence		A	A	H	P	A	X	G	N	L	T	V	S	V	N	L	S	T	G	E	I	D	R	P	G	L	V	A	D	V	A	.	E	T	L	R	V	N	R	L	P	R	G	A	L	K	L	E	V	T	E	S	D	I	X	R	D	P	E	R	A	A	V	I	L	K	T	L	R	D	A	G	A	G	L	A	L	D	D	F	F
Template Known Secondary structure					T	T												T	T	G	G	G	S	T	T							.						T	T			T	T	S																												T
Template Predicted Secondary structure																																.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	V	S	T	S	W	I	K	E	L	N	V	E	L	L	K	L	H	P	G	L	V	R	N	I	E	K	R	T	E	N	Q	L	L	V	Q	S	L	V	E	A	C	S	G	T	S	T	Q	V	Y	A	T	G	V	R	S	R	S	E	W	Q	T	L	I	Q	R	G	V	T	G	G	Q	G	D	F	F	A	S
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	S	S	L	S	Y	L	T	R	L	P	F	D	T	L	K	I	D	R	Y	F	V	R	T	X	G	N	N	A	G	S	A	K	I	V	R	S	V	V	K	L	G	Q	D	L	D	L	E	V	V	A	E	G	V	E	N	A	E	X	A	H	A	L	Q	S	L	G	C	D	Y	G	Q	G	F	G	Y	A	P
Template Known Secondary structure		.	.	.									S															T	T	T																		T	T										S											T						B	T	T	T	B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	P	L	D	T	N	V	K	K	Y	S	Q	R	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	S	P	Q	E	A	E	V	Y	L	N	E	A	Y	V
Template Known Secondary structure			B												S		B
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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