Return to main results Retrieve Phyre Job Id

Job DescriptionP13518
Confidence97.75%DateThu Jan 5 11:33:38 GMT 2012
Rank24Aligned Residues73
% Identity12%Templatec3p7nB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   209210.........220.........230.........240.........250.........260.........270.........280.
Predicted Secondary structure 
















Query SS confidence 








































































Query Sequence  AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQ
Query Conservation             
   
  
 



 

  
   
               
    
     

   
    
  
Alig confidence 








































































Template Conservation                      
                
               


 

 


  

  

 
Template Sequence  MARRERAAEMLKTLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSADLVRIAVEAGI
Template Known Secondary structure  TTS
TT

T

TT

STT
Template Predicted Secondary structure 





























Template SS confidence 








































































   150.........160.........170.........180.........190.........200.........210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions