Job Description P13518 Confidence 81.03% Date Thu Jan 5 11:33:38 GMT 2012 Rank 173 Aligned Residues 91 % Identity 12% Template c3lloA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:prestin; PDBTitle: crystal structure of the stas domain of motor protein prestin (anion2 transporter slc26a5) Resolution 1.57 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	T	S	W	I	K	E	L	N	V	E	L	L	K	L	H	P	G	L	V	R	N	I	E	K	R	T	E	N	Q	L	L	V	Q	S	L	V	E	A	C	S	G	T	S	T	Q	V	Y	A	T	G	V	R	S	R	S	E	W	Q	T	L	I	Q	R	G	V	T	G	G	Q	G	D	F	F	A	S	S	Q
Query Conservation
Alig confidence																																	.	.																						.
Template Conservation																																	.	.																						.
Template Sequence		Y	A	N	S	D	L	Y	S	S	A	N	I	H	T	V	I	L	D	F	T	Q	V	N	F	M	D	S	V	G	V	K	.	.	T	L	A	G	I	V	K	E	Y	G	D	V	G	I	Y	V	Y	L	A	G	C	.	S	A	Q	V	V	N	D	L	T	S	N	R	F	F	E	N	P	A	L	K	E	L	L	F	H
Template Known Secondary structure														S							T	T											.	.											T	T	T							S		.											T	T	T	T	S	S	G	G	G	G	G	G			S
Template Predicted Secondary structure																																	.	.																						.
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.			.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.		.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		632	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	D	T	N	V	K	K	Y	S	Q	R	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	H	D	A	V	L	G	S	Q	V	R	E	A
Template Known Secondary structure		S								T	S	S
Template Predicted Secondary structure
Template SS confidence
		705	.	.	.	.	710	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions