Return to main results Retrieve Phyre Job Id

Job DescriptionP13518
Confidence92.56%DateThu Jan 5 11:33:38 GMT 2012
Rank74Aligned Residues108
% Identity13%Templatec3cg0A_
PDB info PDB header:lyaseChain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540.........550.........560.........570.........580.........590.........600...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT
Query Conservation              
   
    




        
  
  
 



   
                          



Alig confidence 



















.


























....















..









Template Conservation 
       
   
   
  
.   
     

        
 
  
  ....      
         ..    


  
Template Sequence  DGRLAAATLRIQLESLGYDV. LGVFDNGEEAVRCAPDLRPDIALVDIM. . . . LCGALDGVETAARLAA. . GCNLPIIFIT
Template Known Secondary structure 

T
.SS

SSS....

SSS
..S



Template Predicted Secondary structure 




.












....















..









Template SS confidence 















































































   15....20.........30.... .....40.........50.........60. ........70....... ..80.......
 
   604.....610.........620.........630.........640..
Predicted Secondary structure 















Query SS confidence 






































Query Sequence  GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ
Query Conservation 


       
   
    

     
            
Alig confidence 

















....
















Template Conservation                
   .... 
 

     
   
  
Template Sequence  SSQDVETFQRAKRVNPFG. . . . YLAKPVAADTLHRSIEM
Template Known Secondary structure 



TT

S
....


SS

Template Predicted Secondary structure 







....



Template SS confidence 






































   88.90.........100..... ....110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions