Return to main results Retrieve Phyre Job Id

Job DescriptionP13518
Confidence78.22%DateThu Jan 5 11:33:38 GMT 2012
Rank194Aligned Residues106
% Identity9%Templatec2rdmB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein from2 sinorhizobium medicae wsm419
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540.........550.........560 .........570.........580.........590.........600..
Predicted Secondary structure 









.













Query SS confidence 




































.









































Query Sequence  QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE. LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA
Query Conservation              
   
    




        
  .
  
 



   
                          


Alig confidence 





















..












.

















....















.


Template Conservation 
       
   
   
  
  ..
    

   
      



 
  
     
....  
   
        
.
  
Template Sequence  DEAILLLDFESTLTDAGFLVTA. . VSSGAKAIEXLKSGAAIDGVVTDIRFCQPPDG. . . . WQVARVAREIDPNXPI. VYI
Template Known Secondary structure  S
TT
..SSTT



S

SSSS
....
TT

.
Template Predicted Secondary structure 




..














....



.
Template SS confidence 















































































   11........20.........30.. .......40.........50.........60.... .....70.........80 ...
 
   603......610.........620.........630.........640..
Predicted Secondary structure 















Query SS confidence 







































Query Sequence  TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ
Query Conservation 



       
   
    

     
            
Alig confidence 










..





....
















Template Conservation 
          ..      .... 
 

     
   
  
Template Sequence  SGHAALEWASN. . GVPDSI. . . . ILEKPFTSAQLITAVSQ
Template Known Secondary structure  SS
STT..S
TT
....SS

Template Predicted Secondary structure 



..




....



Template SS confidence 







































   84.....90.... .....100 .........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions