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Job DescriptionP13518
Confidence92.58%DateThu Jan 5 11:33:38 GMT 2012
Rank73Aligned Residues150
% Identity14%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   465....470.........480.........490.........500.........510.........520.........530.........540....
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Query Sequence  ISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA
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Template Sequence  LYEVFELIGD. KDFLVNIEIKSGIVLYPGIEEKLIKAIKEYN. . FEERVIISSFNHYSLRDVKK. . . . . . . . MAPHLKIG
Template Known Secondary structure  TT.S



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   102.......110. ........120.........130.........140.. .......150.........160.. .......170
 
   545....550.........560.........570.........580.........590.........600.........610.........620....
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Query Sequence  VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG
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Template Sequence  LLYQCGLVEPWHMALRMEAYSLHPFYFNII. . . . . . . . . . . . PELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIIT
Template Known Secondary structure 
S

SSTTT
SBGGG

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   171........180.........190.........200 .........210.........220.........230........
 
   625....630.........640...
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Query Sequence  DFFASSQPLDTNVKKYSQR
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Template Sequence  DD. . . . . . PETLINLVRKG
Template Known Secondary structure  S
......TTT
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   239240 .........250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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