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Job DescriptionP13518
Confidence79.57%DateThu Jan 5 11:33:38 GMT 2012
Rank190Aligned Residues107
% Identity12%Templatec1ny5A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540.........550.........560.........570.........580.........590.........600...
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Query Sequence  QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT
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Template Sequence  DDKVFRGLLEEYLSMKGIKVE. . SAERGKEAYKLLSEKHFNVVLLDLLL. . . . . PDVNGLEILKWIKERSPETEV. IVIT
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   8.10.........20........ .30.........40.........50.... .....60.........70..... ....
 
   604.....610.........620.........630.........640..
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Query Sequence  GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ
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Template Sequence  GHGTIKTAVEAMKMGAYDF. . . . LTKPCMLEEIELTINK
Template Known Secondary structure  TT
TTT

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   80.........90........ .100.........110....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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