Job Description P0A867 Confidence 100.00% Date Thu Jan 5 11:07:01 GMT 2012 Rank 8 Aligned Residues 293 % Identity 26% Template c3clmA_ PDB info PDB header:lyase Chain: A: PDB Molecule:transaldolase; PDBTitle: crystal structure of transaldolase (yp_208650.1) from neisseria2 gonorrhoeae fa 1090 at 1.14 a resolution Resolution 1.14 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure									.																	.	.	.	.	.	.	.	.																	.
Query SS confidence									.																	.	.	.	.	.	.	.	.																	.
Query Sequence		L	D	G	I	K	Q	F	.	T	T	V	V	A	D	S	G	D	I	E	S	I	R	H	Y	.	.	.	.	.	.	.	.	H	P	Q	D	A	T	T	N	P	S	L	L	L	K	A	A	.	G	L	S	Q	Y	E	H	L	I	D	D	A	I	A	W	G	K	K	N	G	K	T	Q	E	Q	Q	V	V	A	A	C
Query Conservation									.																	.	.	.	.	.	.	.	.																	.
Alig confidence									.																	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		L	S	D	V	K	A	L	G	Q	Q	I	W	L	D	N	L	S	R	S	L	V	Q	S	G	E	L	A	Q	X	L	K	Q	G	V	C	G	V	T	S	N	P	A	I	F	Q	K	A	F	A	G	D	A	L	Y	A	D	E	V	A	A	L	K	R	Q	N	L	S	P	K	Q	R	Y	E	T	X	A	V	A	D	V
Template Known Secondary structure								T	T						S									T	S							T	T	T																			T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		74	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		D	K	L	A	V	N	F	G	A	.	.	E	I	L	K	I	V	P	G	R	V	S	T	E	V	D	A	R	L	S	F	D	K	E	K	S	I	E	K	A	R	H	L	V	D	L	Y	Q	Q	Q	G	V	E	K	S	R	I	L	I	K	L	A	S	T	W	E	G	I	R	A	A	E	E	L	E	K	E	G	I	N
Query Conservation											.	.
Alig confidence											.	.																																				.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		R	A	A	C	D	V	C	L	A	E	H	E	S	T	G	G	K	T	G	F	V	S	L	E	V	S	P	E	L	A	K	D	A	Q	G	T	V	E	E	A	R	R	L	H	A	A	.	.	.	.	.	I	A	R	K	N	A	X	I	K	V	P	A	T	D	A	G	I	D	A	L	E	T	L	V	S	D	G	I	S
Template Known Secondary structure															T	T	S	S	S									G	G	G	T	T																.	.	.	.	.				T	T								S													T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	N	L	T	L	L	F	S	F	A	Q	A	R	A	C	A	E	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	I	S	P	F	V	G	R	I	Y	D	W	Y	Q	A	R	K	P	M	D	P	Y	V	V	E	E	D	P	G	V	K	S	V	R	N	I	Y	D	Y	Y	K	Q
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																											.	.	.
Template Sequence		V	N	L	T	L	L	F	S	R	A	Q	T	L	K	A	Y	A	A	Y	A	R	G	I	A	K	R	L	A	A	G	Q	S	V	A	H	I	Q	V	V	A	S	F	F	I	S	R	V	D	S	A	L	D	A	T	L	P	D	.	.	.	R	L	K	G	K	T	A	I	A	L	A	K	A	A	Y	Q	D	W	E	Q
Template Known Secondary structure																														T	T				T	T																	G	G	G	S		G	.	.	.	G	G	T	T	T
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		215	.	.	.																					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		H	H	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	V	M	G	A	S	F	R	R	T	E	Q	I	L	A	L	T	G	C	D	R	L	.	T	I	A	P	N	L	L	K	E	L	Q	E	K	V	S	P	V	V	R	K	L	I	P	P	S	Q	T	F	P	R	P	A
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.								.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.
Template Sequence		Y	F	T	A	P	E	F	A	A	L	E	A	Q	G	A	N	R	V	Q	L	L	W	A	S	T	G	V	K	N	P	A	Y	P	D	T	L	Y	V	D	S	L	I	G	V	H	T	V	N	T	V	P	D	A	T	L	.	.	.	.	.	.	.	.	K	A	F	I	D	H	G	T	A	K	A	T	L	T	E	S	A
Template Known Secondary structure					S								T	T	T										S		S				T	T	S		T	T									T	T											.	.	.	.	.	.	.	.													T	T	T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290									.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		274	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		P	M	S	E	A	E	F	.	.	.	.	R	W	E	H	N	Q	D	A	M	A	V	E	K	L	S	E	G	I	R	L	F	A	V	D	Q	R	K	L	E	D	L	L
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		D	E	A	R	A	R	L	A	E	I	A	A	L	G	I	D	V	E	T	L	A	A	R	L	Q	E	D	G	L	K	Q	F	E	E	A	F	E	K	L	L	A	P	L
Template Known Secondary structure														T	T																											G	G	G
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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