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Job DescriptionP0A867
Confidence14.74%DateThu Jan 5 11:07:01 GMT 2012
Rank92Aligned Residues188
% Identity17%Templatec2v5jB_
PDB info PDB header:lyaseChain: B: PDB Molecule:2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PDBTitle: apo class ii aldolase hpch
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120.........130.........140.........150. ........160........
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Query Sequence  GRVSTEVDARLSFDKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGIN. CNLTLLFSFAQARACAE
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Template Sequence  GFDWLLIDGEHAPNNVQTVLTQLQAIAP. . . . . . YPSQPVVRPSWNDP. . VQIKQLLDVGTQTLLVPMVQNADEAREAVR
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STTTSS

TT......SSS
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   35....40.........50.........60.. .......70...... ...80.........90.........100......
 
   169 170.........180.........190.........200.........210.........220... ......230.......
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Query Sequence  A. . . . . . GVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYETIVMG. . . . . ASFRRTEQILALTG
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Template Sequence  ATRYPPAGIRGVGSALARASRWNRIP. . . . . . . . . . . . . . . . . . . . . DYLQKANDQMCVLVQIETREAMKNLPQILDVEG
Template Known Secondary structure  TS
TTT



GGGTTTGGGTTTTST.....................T

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   107..110.........120.........130.. .......140.........150.........160.....
 
   238.240....... ..250.........260.........270.........280.........290.. .......300
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Query Sequence  CDRLTIAPNL. . . . . . . . . . . . . . . LKELQEKVSPVVRKLIPPSQTFPRPAPMSEAEFRWEHNQDAMAVE. . KLSEGIRL
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Template Sequence  VDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIANEQLAKRYLELGALFVAVGVDTTLLARAAEA
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   301.....
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Query Sequence  FAVDQR
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Template Sequence  LAARFG
Template Known Secondary structure  TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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