Job Description P0AB87 Confidence 5.90% Date Thu Jan 5 11:14:53 GMT 2012 Rank 63 Aligned Residues 114 % Identity 11% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.
Query Sequence		I	T	P	T	G	I	P	Y	E	K	L	T	E	S	H	I	V	F	I	D	G	N	G	K	H	E	E	G	K	L	P	S	S	E	W	R	F	H	M	A	A	Y	Q	.	.	.	.	.	.	.	.	.	S	R	P	D	A	N	A	V	V	H	N	H	A	V	H	C	T	A	V	S	I	L	N	R	S	I	P	A
Query Conservation																																													.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		M	T	A	H	A	D	P	M	T	A	F	K	D	A	D	V	A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	P	A	N	T	N	A	Y	I	A	M	K	S	A	.	.	.
Template Known Secondary structure						S						T	T	T		S												T	T																									S		T	T							S	S	S											T		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.				.	.	.	160	.	.	.
Predicted Secondary structure																																								.	.	.	.	.									.	.	.
Query SS confidence																																								.	.	.	.	.									.	.	.
Query Sequence		I	H	Y	M	I	A	A	A	G	G	N	S	I	P	C	A	P	Y	A	T	F	G	T	R	E	L	S	E	H	V	A	L	A	L	K	N	R	K	.	.	.	.	.	A	T	L	L	Q	H	H	G	.	.	.	L	I	A	C	E	V	N
Query Conservation																																								.	.	.	.	.									.	.	.
Alig confidence		.	.	.	.	.	.	.																																.	.	.	.	.									.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	P	S	L	P	A	K	N	F	T	A	M	L	R	L	D	H	N	R	A	L	S	Q	I	A	A	K	T	G	K	P	V	S	S	I	E	K	L	F	V	W	G	N	H	S	P	T	M	Y	A	D	Y	R	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	S		G	G	G																					T			G	G	G			S					B		S	S	T	T						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions