Job Description P05020 Confidence 97.82% Date Thu Jan 5 10:58:35 GMT 2012 Rank 130 Aligned Residues 239 % Identity 16% Template d1yrra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.00

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		12	.	.	.	.	.	.	.							20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.				.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.				.	.	.	.	.	.	.
Query Sequence		R	P	D	D	W	H	L	H	.	.	.	.	.	.	L	R	D	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T
Query Conservation										.	.	.	.	.	.				.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.				.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L	E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	.	.	.	.	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H
Template Known Secondary structure									S			T	T			S	S	S	S	T	T	T	S	S														T	T						.	.	.	.																										T	T	S	B
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	E	A	R	F	I
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	P	W	L	N	.	.	.	.	L	V	K	K	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	P	E	M	V	P	.	.	.	.	.	.	.	.	.	A	E	V	I
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S			.	.	.	.		S						S		S															T	T	T	T								G	G	G	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		130																	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																								.															.
Query SS confidence																								.															.
Query Sequence		E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	.	T	K	D	A	A	D	Y	V	R	D	G	N	E	R	.	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R
Query Conservation																								.															.
Alig confidence								.	.	.	.	.	.											.															.			.	.	.	.	.	.				.	.	.				.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation								.	.	.	.	.	.																													.	.	.	.	.	.				.	.	.				.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		S	K	L	A	N	A	.	.	.	.	.	.	G	I	V	V	S	A	G	H	S	N	A	T	L	K	E	A	K	A	G	F	R	A	G	I	T	F	A	T	.	.	.	.	.	.	H	L	Y	.	.	.	N	A	M	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	I	T	G	R	E	P	G	.	L	A	G
Template Known Secondary structure							T	.	.	.	.	.	.	T							S															T					S	.	.	.	.	.	.	S	T	T	.	.	.	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.					S	S				.
Template Predicted Secondary structure								.	.	.	.	.	.																													.	.	.	.	.	.				.	.	.				.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		182	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.				.	220	.													.	.	.	.	.	.	.	.	230		.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.											.	260					.	.	.	.	.	.	.	.	.	270																												.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	.	.	.	.	.	.	.	.	.	.	R	K	.	.	.	.	E	S	S	C	G	C	A	G	C	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	P	T	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E	Q	F	I	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M
Template Known Secondary structure							T	T								S	S	S	S	S													G	G	G							B		T	T	T	T	S			S					T	T							S	S					T	T						B
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		276	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	G	S	Y	A	T	V	F	E	E	.	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	P	V	N	D	T
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		I	E	G	V	R	N	L	V	E	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E	K	R	L	G
Template Known Secondary structure																								T							T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions