Job Description P05020 Confidence 99.56% Date Thu Jan 5 10:58:35 GMT 2012 Rank 67 Aligned Residues 262 % Identity 13% Template d1ra0a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Cytosine deaminase catalytic domain Resolution 1.12

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		13	.	.	.	.	.	.	20	.	.																																				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	D	W	H	L	H	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M
Template Known Secondary structure									T	T	T	T	T		T	T	S	S	S			S	S															T	T																				T	T												S	T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L
Query Conservation
Alig confidence											.																																								.	.	.	.
Template Conservation											.																																								.	.	.	.
Template Sequence		L	E	V	K	Q	E	V	A	P	.	W	I	D	L	Q	I	V	A	F	P	Q	E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	G	A	D	V	V	G	A	I	P	.	.	.	.	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R	L	I
Template Known Secondary structure									T	T	.	T										T	T		S	S	S	S	T	T											T	T		S						G	.	.	.	.	G	G	S	S	S																			T
Template Predicted Secondary structure											.																																								.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.
Query Sequence		L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	.	.	.	.	.	.	.	.	.	K	D	A	A	D	Y	V	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R
Query Conservation																																														.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.												.	.												.	.	.
Template Conservation																		.	.	.	.	.	.																																											.	.												.	.	.
Template Sequence		D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	.	.	.	.	.	.	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	.	.	I	N	F	V	A	N	P	L	V	N	I	.	.	.
Template Known Secondary structure								S	S		T	T						.	.	.	.	.	.										T		G	G	G							G	G	G	G	G	S																T	.	.												.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.																																											.	.												.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		N	H	M	L	V	G	G	V	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	.	.	E	E	M
Query Conservation																																																																													.	.
Alig confidence																			.	.	.	.	.	.	.	.	.													.								.	.	.	.	.	.	.																							.	.
Template Conservation																			.	.	.	.	.	.	.	.	.													.								.	.	.	.	.	.	.
Template Sequence		H	L	Q	G	R	F	D	T	Y	P	K	R	R	G	I	T	R	.	.	.	.	.	.	.	.	.	V	K	E	M	L	E	S	G	I	N	V	C	.	F	G	H	D	G	V	F	.	.	.	.	.	.	.	D	P	W	Y	P	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y
Template Known Secondary structure				T	T	T	T			S	S								.	.	.	.	.	.	.	.	.							T	T					.				B		S	S	.	.	.	.	.	.	.	B	T	T	B	S																	T	T			S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.													.								.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.										.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.								.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q
Template Known Secondary structure						G	G	G	G	G	G	T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions