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Job DescriptionP05020
Confidence98.94%DateThu Jan 5 10:58:35 GMT 2012
Rank104Aligned Residues244
% Identity16%Templated1p1ma2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases SAH/MTA deaminase-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.. .......30.........40.........50........
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Query Sequence  RPDDWHLHLRD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVA
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Template Sequence  ALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF. . . . . . . . . HEEW
Template Known Secondary structure 

GGGGGGTTSS
S

TTTT

TTTS.........S
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   50.........60.........70.........80.........90.........100.........110...... ...120
 
   5960.........70.........80.........90.........100.........110.........120.........130........
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Query Sequence  YRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLL
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Template Sequence  IAKAVRDFGMRALLTRGLVDSNGDDGGRLEENLKLYNEWNGFEGRIFVGFGPH. . SPYLCSEEYLKRVFDTAKSLNAPVT
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BTTB
TTTTGGGT
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TTTS
TT

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   121........130.........140.........150.........160.........170... ......180.........190........
 
   139140.........150.........160.........170.........180 .........190.........200.........210......
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Query Sequence  VHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHIT. . TKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGV
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Template Sequence  IHLYETSKEEYD. . . . . . . . . . LEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIP. . FFVSHNPASNLKLGNGI. . . . .
Template Known Secondary structure  S
STT



..........TTTTTTTS

TT

GGGTTTTTTSS..
TT


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   199200.........210 .........220.........230.........240.... .....250.........260.
 
   217..220.........230.........240.........250.........260.........270.........280.........290......
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Query Sequence  RPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFC
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Template Sequence  . . . . . . . AP. . . . . . . . . . VQRMIEHGMKVTLGTDGAA. . . . . . . SNNSLNLFFEMRLASLLQKAQNPRNLDVNTCLKMV
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..........TT




TT.......TTS


TT
TTSS
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   262. ......270.........280.. .......290.........300.........310.......
 
   297..300.......
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Query Sequence  SVNGPQFYGLP
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Template Sequence  TYDGAQAMGFK
Template Known Secondary structure  TT
S
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   318.320........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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