Job Description P05020 Confidence 100.00% Date Thu Jan 5 10:58:35 GMT 2012 Rank 5 Aligned Residues 287 % Identity 17% Template d1gkra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.60

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		12	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		R	P	D	D	W	H	L	H	L	R	D	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L	T	D	S
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																																																									.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		G	V	V	D	E	H	V	H	I	I	D	M	D	L	K	N	R	Y	G	R	F	E	L	D	S	E	S	A	A	V	G	G	I	T	T	I	I	E	M	P	I	T	F	P	P	T	T	T	L	D	A	F	L	E	K	K	K	Q	A	G	Q	R	L	K	V	D	F	A	L	Y	G	G	G	V	.	.	.	.	.	P
Template Known Secondary structure													G	G	G	T	T	T	S														T								S		S	S	S		S		S																S	S					B					.	.	.	.	.	T
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.														.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.														.	.
Template Sequence		G	N	L	P	E	I	R	K	M	H	D	A	G	.	A	V	G	F	S	M	M	A	A	S	V	P	G	.	.	M	F	D	A	V	S	D	G	E	L	F	E	I	F	Q	E	I	A	A	C	G	S	V	I	V	V	H	A	E	N	E	T	I	I	Q	A	L	Q	K	Q	I	K	A	A	G	G	K	D	M	A	A
Template Known Secondary structure		T											T	T	.			B			B	S	S		S	B	T	T	.	.	T	B		B																	T						B																	T	T			S
Template Predicted Secondary structure															.														.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		H	A	D	I	D	I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	D	Y	V	.	.	.	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L	Y
Query Conservation																																														.	.	.
Alig confidence																						.	.																							.	.	.																												.	.
Template Conservation																						.	.																																																					.	.
Template Sequence		Y	E	A	S	Q	P	V	F	Q	E	N	E	A	I	Q	R	A	L	L	L	.	.	Q	K	E	A	G	C	R	L	I	V	L	H	V	S	N	P	D	G	V	E	L	I	H	Q	A	Q	S	E	G	Q	D	V	H	C	E	S	G	P	Q	Y	L	N	I	T	T	D	D	A	E	R	I	G	.	.	P	Y	M	K
Template Known Secondary structure						S																.	.															S													T	T													S			G	G	G					G	.	.	G	G	G
Template Predicted Secondary structure																						.	.																																																					.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.		.	.	.	290	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.																			.						.
Query SS confidence																																												.	.	.	.	.																			.						.
Query Sequence		C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	.	.	.	.	.	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	.	V	F	E	E	M	.	N	A	L	Q	H	F	E	A
Query Conservation																																												.	.	.	.	.																			.						.
Alig confidence																											.																	.	.	.	.	.																			.						.
Template Conservation																											.
Template Sequence		V	A	P	P	V	R	S	A	E	M	N	I	R	L	W	E	Q	L	E	N	G	L	I	D	T	.	L	G	S	D	H	G	G	H	P	V	E	D	K	E	P	G	W	K	D	V	W	K	A	G	N	G	A	L	G	L	E	T	S	L	P	M	M	L	T	N	G	V	N	K	G	R	L	S	L	E	R	L	V	E
Template Known Secondary structure			S	S																		T					.										G	G	G	T	G	G	G	G	T		G	G	G	S				B			T	T	T									T	G	G	G	T	S	S
Template Predicted Secondary structure																											.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	S	V	N	G	P	Q	F	Y	G	L	P	V	N	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	C	E	K	P	A	K	L	F	G	I	Y	P	Q	K	G
Template Known Secondary structure				T								T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions