Job Description P05020 Confidence 98.32% Date Thu Jan 5 10:58:35 GMT 2012 Rank 118 Aligned Residues 262 % Identity 11% Template c3rhgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative phophotriesterase; PDBTitle: crystal structure of amidohydrolase pmi1525 (target efi-500319) from2 proteus mirabilis hi4320 Resolution 1.53 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.																																															.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	D	D	W	H	L	H	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	L	P	H	E	H	L	F	N	D	L	S	G	V	V	D	E	P	F	Y	E	F	S	H	V	L	V	D	K	K	V	S	A	D	I	Q	W	G	L	K	Y	D	P	Y	C	C	C	D	N	M	D	K	K	P	I	E	D	V	I	F	E	L	N	N	F	K	E	L	G	G	K	T	I	V	D	A	T	G
Template Known Secondary structure										S	S				G	G	G						S	T	T	G	G	G	G	T	T	S				G	G	G					T	T		G	G	G						S																	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L	.	.	.	.	.	.	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	.	.	.	.	.	A	K	L	Y	P	A	N	A	T	T	N	S	S
Query Conservation																																						.	.	.	.	.	.																					.	.	.	.	.
Alig confidence																			.	.	.	.	.	.														.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		S	S	S	I	G	R	D	I	R	K	L	K	Q	V	A	E	L	.	.	.	.	.	.	T	G	I	N	V	V	A	S	S	G	L	Y	I	E	K	F	E	G	K	R	L	A	D	D	I	D	A	M	A	K	M	I	D	D	E	L	N	I	G	I	D	G	T	D	I	R	A	G	M	I	G	E	I	G	V	S	P
Template Known Secondary structure		S	G	G	G	T													.	.	.	.	.	.																		G	G	G	G	G	S															T		S	T	T	S	S													T
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.					180	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																																						.								.	.	.	.
Query SS confidence																							.	.																																						.								.	.	.	.
Query Sequence		H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	.	.	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	.	K	V	V	F	E	H	I	.	.	.	.	T	T	K	D	A	A	D	Y
Query Conservation																							.	.																																						.								.	.	.	.
Alig confidence																							.	.													.	.	.	.	.	.	.	.	.																	.								.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		F	F	T	D	G	E	K	N	S	L	R	A	A	A	L	A	Q	N	N	N	P	Y	A	S	M	N	I	H	M	P	G	W	Q	R	R	.	.	.	.	.	.	.	.	.	G	D	E	V	L	D	I	L	L	T	E	M	G	C	D	P	A	K	I	S	L	A	H	S	D	P	S	G	K	D	I	D	Y	Q	C	K
Template Known Secondary structure		T																	T	T		T	T									T	T	S			.	.	.	.	.	.	.	.	.									T	T	T	T				G	G	G				S			G	G	G	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																															.												.
Query SS confidence																																															.												.
Query Sequence		V	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	.	Q	A	L	R	E	L	V	A	S	G	F	.	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G
Query Conservation																																															.												.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.										.												.									.											.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.											.	.	.
Template Sequence		M	L	D	R	G	V	W	L	E	F	D	M	I	G	L	D	I	S	F	P	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	P	S	V	M	D	T	V	E	A	V	A	T	L	I	E	R	G	Y	G	N	Q	I	V	L	S	H	D	.	V	F	L	K	Q	M	W	A	K	N	.	.	.
Template Known Secondary structure					T	T								T	T				B		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B																	T	T		G	G	G							.			S	G	G	G	S	G	G	G	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.											.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.															.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	.	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	P	V
Query Conservation																				.
Alig confidence		.	.																	.
Template Conservation		.	.
Template Sequence		.	.	G	G	N	G	W	G	F	V	P	N	V	F	L	S	L	L	A	Q	R	G	I	D	K	T	I	I	D	K	L	C	I	D	N	P	A	N	L	L	A	A	E	N
Template Known Secondary structure		.	.	T	S		T	T	T					T								T	T										T	T									S
Template Predicted Secondary structure		.	.
Template SS confidence
				305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions