Job Description P05020 Confidence 98.49% Date Thu Jan 5 10:58:35 GMT 2012 Rank 117 Aligned Residues 247 % Identity 15% Template c3ij6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from lactobacillus acidophilus Resolution 2.00 Å

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		14	.	.	.	.	.	20																									.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.																															.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.																															.	.	.	.	.	.	.	.
Query Sequence		D	D	W	H	L	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	.	.	.	.	.	.	.	.	V	E	A	A	V	A	Y
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.																															.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	A	Y	A	H	I	L	P	A	K	Y	Y	Q	K	M	L	S	V	E	P	N	I	P	N	M	F	P	F	I	K	I	K	T	L	M	D	L	D	E	R	L	T	K	W	P	D	Q	N	T	K	Q	V	I	S	L	A	N	I	S	P	E	D	F	T	D	S	K	T	S	A	E	L	C	Q	S	A	N	E	E
Template Known Secondary structure																						T	T						G	G	G	G													T		S		T	T									S			G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		L	S	N	L	V	D	Q	H	P	G	K	F	A	G	A	V	A	I	L	P	M	N	N	I	E	S	A	C	K	V	I	S	S	I	K	D	D	E	N	L	V	G	A	Q	I	F	.	.	.	.	.	T	R	H	L	G	K	S	I	A	D	K	E	F	R	P	V	L	A	Q	A	A	K	L	H	V	P	L	W	M
Template Known Secondary structure										T	T	T										T	T																T	T								.	.	.	.	.	S			T	T			T	T	S	T	T	T										T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		140								.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.										.	.
Query SS confidence			.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.										.	.
Query Sequence		H	.	.	.	.	.	.	.	G	E	V	T	H	A	D	I	D	I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	.	.	.	.	.	.	.	.	D	A	A	D	Y	V	R	D	G	.	.	N	E	R	L	A	A	T	I	T	P	Q
Query Conservation			.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.										.	.
Alig confidence			.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.										.	.											.
Template Conservation																																																																																	.
Template Sequence		H	P	V	F	D	A	R	K	P	D	N	N	L	V	F	S	W	E	Y	E	L	S	Q	A	M	L	Q	L	V	Q	S	D	L	F	Q	D	Y	P	N	L	K	I	L	V	H	H	A	G	A	M	V	P	F	F	S	G	R	I	D	H	I	L	D	E	K	H	A	Q	D	F	K	K	F	Y	V	D	T	A	I	.
Template Known Secondary structure							T	T	S	S	S			T	T	T																T	T						T	T						S	G	G	G	T	T	T	T	T	S								S								G	G	G							S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	N	T	P	A	L	Q	L	A	I	D	Y	Y	G	I	D	H	V	.	.	L	F	G	T	D	.	.	.	.	.	.	.	.	.	.	A	P	F	A	V	M	P	S	G	A	D	Q	I	I	T	Q	A	I	N	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S														G	G	G		.	.						.	.	.	.	.	.	.	.	.	.	B	T	S	S	S	T	T	T		S										T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.											.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	I	S	D	K	D	K	Q	K	I	F	H	D	N	Y	Y	S	L	I
Template Known Secondary structure		.	.	.	S	S										T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions