Job Description P05020 Confidence 99.69% Date Thu Jan 5 10:58:35 GMT 2012 Rank 50 Aligned Residues 318 % Identity 11% Template c3hpaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of an amidohydrolase gi:44264246 from an2 evironmental sample of sargasso sea Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	L	H	L	R	D	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L
Query Conservation																				.	.	.
Alig confidence																				.	.	.																												.	.	.
Template Conservation																																																		.	.	.
Template Sequence		R	G	H	L	V	I	P	G	L	V	N	T	H	H	H	M	Y	Q	S	L	T	R	A	V	P	A	A	Q	N	A	E	L	F	G	W	L	T	N	L	Y	K	I	W	A	H	L	T	P	.	.	.	E	M	I	E	V	S	T	L	T	A	M	A	E	L	L	Q	S	G	C	T	T	S	S	D	H	L	Y	I	Y
Template Known Secondary structure		T	T														G	G	G	G	G	S		S						T															T	T				.	.	.																T	T	T								B
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	E	A	R	F	I	E	S	V
Query Conservation
Alig confidence																																.	.	.	.	.	.																										.	.
Template Conservation																																.	.	.	.	.	.																										.	.
Template Sequence		P	N	G	S	R	L	D	D	S	I	G	A	A	Q	R	I	G	M	R	F	H	A	S	R	G	A	M	S	E	P	.	.	.	.	.	.	D	I	L	R	D	T	Q	R	L	I	E	T	Y	H	D	E	G	R	Y	A	M	L	R	V	V	.	.	V	A	P	C	S	P	F	S	V	S	R	D	L	M	R	D	A
Template Known Secondary structure			T	T														T														.	.	.	.	.	.																	S	T	T		S					.	.				S		T	T	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.																										.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																													.	.	.																									.														.	.
Query SS confidence																													.	.	.																									.														.	.
Query Sequence		M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	D	Y	V	.	.	.	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	.	V	G	G	V	R	P	H	L	Y	C	L	P	I	.	.	L	K	R	N	I	H	Q	Q	A	L
Query Conservation																													.	.	.																									.														.	.
Alig confidence																													.	.	.																									.														.	.
Template Conservation
Template Sequence		A	V	L	A	R	E	Y	G	V	S	L	H	T	H	L	A	E	N	V	N	D	I	A	Y	T	P	A	E	Y	A	E	D	L	G	W	V	G	H	D	V	W	H	A	H	C	V	Q	L	D	D	A	G	I	G	L	F	A	R	T	G	T	G	V	A	H	C	P	C	S	N	M	R	L	A	S	G	I	A	P	V
Template Known Secondary structure									T								S		S					T									T	T	T			S	T	T							T	T													T													T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																		.																								.	.	.	.	.	.	.	.
Query SS confidence																																																		.																								.	.	.	.	.	.	.	.
Query Sequence		R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	.	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	.	.	.	.	.	.	.	.
Query Conservation																																																		.																								.	.	.	.	.	.	.	.
Alig confidence													.										.	.	.	.	.	.	.																					.																								.	.	.	.	.	.	.	.
Template Conservation													.										.	.	.	.	.	.	.
Template Sequence		K	K	M	R	L	A	G	V	P	V	G	.	L	G	V	D	G	S	A	S	N	.	.	.	.	.	.	.	D	G	A	Q	M	V	A	E	V	R	Q	A	L	L	L	Q	R	V	G	F	G	P	D	A	M	T	A	R	E	A	L	E	I	A	T	L	G	G	A	K	V	L	N	R	D	D	I	G	A	L	K	P
Template Known Secondary structure								T					.						T	T	S	S	.	.	.	.	.	.	.																						T	T	S	S										T								T		S	S	S	S	S		S	T
Template Predicted Secondary structure													.										.	.	.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.								.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
			307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.										.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure		.																				.	.	.	.	.	.	.	.	.
Query SS confidence		.																				.	.	.	.	.	.	.	.	.
Query Sequence		.	P	V	N	D	T	F	I	E	L	V	R	E	E	Q	Q	V	A	E	S	.	.	.	.	.	.	.	.	.	I	A	L	T	D	D	T	L	V	P	F	L	A	G	E	T	V
Query Conservation		.																				.	.	.	.	.	.	.	.	.
Alig confidence		.																				.	.	.	.	.	.	.	.	.												.
Template Conservation																																										.
Template Sequence		G	M	A	A	D	F	A	A	F	D	L	R	Q	P	L	F	A	G	A	L	H	D	P	V	A	A	L	V	F	C	A	P	S	Q	T	A	Y	T	V	V	.	N	G	K	V	V
Template Known Secondary structure		T	S	B								T	T	S	G	G	G	T	T		T	T	S								S	S					S					.	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions