Phyre 2 alignment of P05020 with c3egjA

Job Description P05020
Confidence 99.30% Date Thu Jan 5 10:58:35 GMT 2012

Rank 92 Aligned Residues 274

% Identity 10% Template c3egjA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: n-acetylglucosamine-6-phosphate deacetylase from vibrio cholerae.

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.											.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence	S	Q	V	L	K	I	R	R	P	D	D	W	H	L	H	L	R	D	.	.	.	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	N	G	A	N	L	S	P	G	F	I	D	L	Q	L	N	G	C	G	G	V	M	F	N	D	E	I	T	A	E	T	I	D	T	M	H	K	A	N	L	K	S	G	C	T	S	F	L	P	T	L	I	T	S	S	D	E	N	M	R	Q	A	I	A	A	A	R	E	Y	Q	A	K	Y	P	N	Q	S	L	G	L	H
Template Known Secondary structure	T	T																T	T			T	T	T	S		S													T	T	T										S																				S	S	S	S	B		S
Template Predicted Secondary structure
Template SS confidence
	47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

	75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	L	M	T	C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	E
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Sequence	L	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	L	N	V	M	K	K	G	I	H	S	V	D	F	I	R	P	S	D	D	T	M	I	D	T	I	C	A	N	S	D	V	I	A	K	V	T	L	A	P	E	N	N	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			G	G	G		T	T	S		T	T	T															T	G	G	G								G	G	G	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template SS confidence
	127	.	.																								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

	155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																									.																															.	.	.	.	.	.	.
Query SS confidence																									.																															.	.	.	.	.	.	.
Query Sequence	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	.	I	T	T	K	D	A	A	D	Y	V	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	.	.	.	.	.	.	.	N	H	M	L	V	G	G	V	R	P	H	L	Y	C	L	P	I	L
Query Conservation																									.																															.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.																			.																															.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	P	E	H	I	E	K	L	V	K	A	G	I	V	V	S	I	G	H	T	N	A	T	Y	S	E	A	R	K	S	F	E	S	G	I	T	F	A	T	H	L	F	N	A	M	T	P	M	V	G	R	E	P	G	V	V	G	A	I	Y	D	T	P	E	V	Y	A	G	I	I	A	D	G	F	H
Template Known Secondary structure	.	.	.	.	.	.										T	T							S	B														T					S	S	T	T	S	S	B				B	T	T	B									T		T	T								S	S	S	S
Template Predicted Secondary structure	.	.	.	.	.	.
Template SS confidence
							175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

	227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	E	E	M	N	A	L	Q	H
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence	V	D	Y	A	N	I	R	I	A	H	K	I	K	G	E	K	L	V	L	V	.	T	D	A	T	A	P	A	G	A	E	M	D	Y	F	I	F	V	G	K	K	V	Y	Y	R	D	G	K	C	V	D	E	N	G	T	L	G	G	S	A	L	T	M	I	E	A	V	Q	N	T	V	E	H	V	G	I	A	L	D	E
Template Known Secondary structure	S													G	G	G					.			B		T	T	T	T	S			S					T	T							T	T					T	T	T					B														T	T
Template Predicted Secondary structure																					.
Template SS confidence
	249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

	292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.											.	310	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.
Query Sequence	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	P	V	.	.	.	.	.	.	.	.	.	.	N	D	T	F	I	E	L	V	R
Query Conservation																		.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	A	L	R	M	A	T	L	Y	P	A	K	A	I	G	V	D	E	K	L	G	R	I	K	K	G	M	I	A	N	L	T	V	F	D	R	D
Template Known Secondary structure				T	T	T								T		T	T	T	S	S	S			T	T	S	B								T	T
Template Predicted Secondary structure
Template SS confidence
	328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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