Job Description P05020 Confidence 98.17% Date Thu Jan 5 10:58:35 GMT 2012 Rank 122 Aligned Residues 241 % Identity 13% Template c2xioA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative deoxyribonuclease tatdn1; PDBTitle: structure of putative deoxyribonuclease tatdn1 isoform a Resolution 1.19 Å

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		12	.	.	.	.	.	.	.	20															.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	D	D	W	H	L	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.							.	.	.	.
Template Conservation																																																	.	.	.	.	.	.							.	.	.	.
Template Sequence		K	F	I	D	I	G	I	N	L	T	D	P	M	F	R	G	I	Y	R	G	V	Q	K	H	Q	D	D	L	Q	D	V	I	G	R	A	V	E	I	G	V	K	K	F	M	I	T	G	.	.	.	.	.	.	G	N	L	Q	D	S	.	.	.	.	K	D	A	L	H	L	A	Q	T	N	G	M	F	F	S	T	V
Template Known Secondary structure										T	T		G	G	G	G	T			T	T				S															T									.	.	.	.	.	.		S					.	.	.	.								T	T		T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		78	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		T	C	Y	L	T	D	S	L	D	.	.	.	.	.	.	.	.	.	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	.	.	.	.	.	.	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E
Query Conservation											.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.													.	.	.																				.	.	.	.	.	.
Template Conservation																																.	.	.
Template Sequence		G	C	H	P	T	R	C	G	E	F	E	K	N	N	P	D	L	Y	L	K	E	L	L	N	L	A	E	N	N	K	.	.	.	G	K	V	V	A	I	G	E	C	G	L	D	F	D	R	L	Q	F	C	P	K	D	T	Q	L	K	Y	F	E	K	Q	F	E	L	S	E	Q	T	K	L	P	M	F	L	H	C	R
Template Known Secondary structure					G	G	G	T																					T		T	.	.	.	T	T											T	T		T	T	T	S												T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		V	T	H	A	D	I	D	I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	.	.	T	T	K	D	A	A	D	Y	V	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L
Query Conservation																																							.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	A	E	F	L	D	I	T	K	R	N	R	D	R	C	V	G	G	V	V	H	S	F	D	G	T	K	E	A	A	A	A	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	L	Y	I
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.												T	G	G	G	S	S					T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152														.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																										.	.	190	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																										.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																										.	.
Template Sequence		G	F	N	G	C	S	L	K	T	E	A	N	L	E	V	L	K	S	I	P	S	E	K	L	.	.	M	I	E	T	D	A	P	W	C	G	V	K	S	T	H	A	G	S	K	Y	I	R	T	A	F	P	T	K	K	K	W	E	S	G	H	C	L	K	D	R	N	E	P	C	H	I	I	Q	I	L	E	I	M	S
Template Known Secondary structure					G	G	G	S	S	S									T	S		G	G	G		.	.						T	T	S					T	T	S	T	T	G	G	G									S	S			T	T	S			T	T				G	G	G
Template Predicted Secondary structure																										.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
			284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	V	R	D	E	D	P	L	E	L	A	N	T	L	Y	N	N	T	I	K	V	F	F
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions