Job Description P05020 Confidence 99.67% Date Thu Jan 5 10:58:35 GMT 2012 Rank 54 Aligned Residues 297 % Identity 14% Template c2r8cB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative amidohydrolase; PDBTitle: crystal structure of uncharacterized protein eaj56179 Resolution 2.31 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.																		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	L	H	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		K	G	K	T	I	M	P	G	L	I	D	L	H	V	H	V	V	A	I	E	F	N	L	P	R	V	A	T	L	P	N	V	L	V	T	L	R	A	V	P	I	M	R	A	M	L	R	R	G	F	T	T	V	R	D	A	G	G	A	G	.	.	.	.	.	.	.	.	.	Y	P	F	K	Q	A	V	E	S	G	L
Template Known Secondary structure		T	T														T	T			S	S						T	T	S																			T	T								S	S			.	.	.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																																		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	G	H	D	F	T	P	L	M	T	C	Y	L	T	D	S	L	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	G	P	R	L	F	V	S	G	R	A	L	S	Q	T	G	G	H	A	D	P	R	A	R	S	D	Y	M	P	P	D	S	P	G	C	C	V	R	V	G	A	L	G	R	V	A	D	G	V	D	E	V	R	R	A	V	R	E	E	L	Q	M	G	A	D	Q	I	K	I	M	A	S	G	G	V	P	T	D	P
Template Known Secondary structure		S										S					T	T	S	T	T						S	S	S				S					S			T	T								S														T	T		S	S						B
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		115	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		H	G	.	.	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	D	Y	V	R	D	G	N
Query Conservation				.	.
Alig confidence				.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	F	G	Y	S	E	D	E	I	R	A	I	V	A	E	A	Q	G	R	G	T	Y	V	L	A	H	A	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	I	A	R	A	V	R	C	G	V	R	T	I	E	H	G	N	L	I	D	D	E	T	A	R	L	V	A	E	H	G
Template Known Secondary structure		S	S	S	B		S															T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S						T	T												T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A
Query Conservation
Alig confidence																					.	.																																		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																																		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	V	V	P	T	L	V	T	Y	D	A	L	A	S	E	G	E	K	.	.	Y	G	L	P	P	E	S	I	A	K	I	A	D	V	H	G	A	G	L	H	S	I	E	I	M	K	R	A	G	V	K	M	G	.	F	G	T	D	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A
Template Known Secondary structure																	S	T	G	G	.	.	G	T			T	T	S	S	T	T						T	T											T	T					.							G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																					.	.																																		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.																	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.											.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	A	L	G	S	Y	A	T	V	F	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	P	V	.	.	.	.	.	.	.	.	.	.	N	D	T	F	I	E	L	V	R	E	E	Q	Q	V	A	E	S	I	A	L	T	D	D	T	L	V	P	F	L	A	G	E	T	V
Query Conservation																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																																																																																.	.
Template Sequence		Q	R	L	Q	S	D	E	F	R	I	L	A	E	V	L	S	P	A	E	V	I	A	S	A	T	I	V	S	A	E	V	L	G	M	Q	D	K	L	G	R	I	V	P	G	A	H	A	D	V	L	V	V	D	G	N	P	L	K	S	V	D	C	L	L	G	Q	G	E	H	I	P	L	V	M	K	D	G	R	.	.
Template Known Secondary structure		G	G	G	T	T							T	T	T	S									T	T							T	T		B	T	T	B	S	S			T	T	S	B							S	S		T	T	T		G	G	G	S		S	S	S	T	T							T	T		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		343	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	S	V	K	Q
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	F	V	N	E
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			408	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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