Phyre 2 alignment of P05020 with c2qahA

Job Description P05020
Confidence 98.56% Date Thu Jan 5 10:58:35 GMT 2012

Rank 115 Aligned Residues 242

% Identity 14% Template c2qahA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:2-pyrone-4,6-dicarboxylic acid hydrolase; PDBTitle: crystal structure of the 2-pyrone-4,6-dicarboxylic acid2 hydrolase from sphingomonas paucimobilis

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	11	.	.	.	.	.	.	.	.	20																		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	R	R	P	D	D	W	H	L	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence	P	G	A	I	D	A	H	C	H	V	F	G	P	M	A	Q	F	P	F	S	P	K	A	K	Y	L	P	R	D	A	G	P	D	M	L	F	A	L	R	D	H	L	G	F	A	R	N	V	I	V	Q	A	S	C	H	G	T	D	N	.	.	.	.	.	.	.	.	A	A	T	L	D	A	I	A	R	A	Q	G	K
Template Known Secondary structure	T	T									B			T	T	T	S				G	G	G		S		B			B													T		S								G	G	G	T	T			.	.	.	.	.	.	.	.										T	T	T	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
	25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.	.

	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	T	P	L	M	T	C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R
Query Conservation
Alig confidence	.																								.															.	.	.	.	.																														.	.	.	.	.	.	.
Template Conservation	.																								.															.	.	.	.	.																														.	.	.	.	.	.	.
Template Sequence	.	A	R	G	I	A	V	V	D	P	A	I	D	E	A	E	L	A	A	L	H	E	G	G	.	M	R	G	I	R	F	N	F	L	K	R	L	V	D	.	.	.	.	.	D	A	P	K	D	K	F	L	E	V	A	G	R	L	P	A	G	W	H	V	V	I	Y	F	E	A	D	I	L	.	.	.	.	.	.	.
Template Known Secondary structure	.									T	T												T	T	.														T	.	.	.	.	.	T												T			T	T									G	G	G		.	.	.	.	.	.	.
Template Predicted Secondary structure	.																								.															.	.	.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.												.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	.	.	.	.	.	.	.	.	.	.	.	D	A	A	D	Y	V	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L	Y	C
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.												.												.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	E	E	L	R	P	F	M	D	A	I	P	.	V	P	I	V	I	D	H	M	G	R	P	D	V	R	Q	G	P	D	G	A	D	M	K	A	F	R	R	L	L	D	S	R	E	D	I	W	F	K	A	T	C	P	D	R	L	D	P	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	.	.	.	.	.	.												.	S					G	G	G	G				G	G	G		T	T	S														T	T													T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure	.	.	.	.	.	.												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							163	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

	223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q
Query Conservation
Alig confidence	.																						.	.						.														.	.	.	.	.	.	.	.	.	.
Template Conservation	.																						.	.						.														.	.	.	.	.	.	.	.	.	.
Template Sequence	.	P	P	W	D	D	F	A	R	S	V	A	P	L	V	A	D	Y	A	D	R	V	.	.	I	W	G	T	D	.	W	P	H	P	N	M	Q	D	A	I	P	D	D	.	.	.	.	.	.	.	.	.	.	G	L	V	V	D	M	I	P	R	I	A	P	T	P	E	L	Q	H	K	M	L	V	T	N	P	M	R
Template Known Secondary structure	.	T	T															T	T	T	S		.	.						.	T	T		T	T		T	T	S					.	.	.	.	.	.	.	.	.	.						T					S		S									T
Template Predicted Secondary structure	.																						.	.						.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.											.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

	303	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	Y	G	L	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence	L	Y	W	S	E	E
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
	289	290	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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