Job Description P05020 Confidence 99.69% Date Thu Jan 5 10:58:35 GMT 2012 Rank 49 Aligned Residues 275 % Identity 11% Template c2pajA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative cytosine/guanine deaminase; PDBTitle: crystal structure of an amidohydrolase from an environmental sample of2 sargasso sea Resolution 2.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.															.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	L	H	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	.	.	.	.	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																																		.
Template Conservation																																																																																	.
Template Sequence		T	D	C	V	I	Y	P	A	W	V	N	T	H	H	H	L	F	Q	S	L	L	K	G	E	P	F	R	A	L	F	D	E	R	R	F	R	L	A	A	R	I	G	L	I	E	L	A	R	S	G	C	A	T	V	A	D	H	N	Y	V	Y	Y	P	G	M	P	F	D	S	S	A	I	L	F	E	E	A	E	K	.
Template Known Secondary structure		B	T														G	G	G	G	G			S				G	G	G																			T	T	T													T	T		S	S													.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A
Query Conservation
Alig confidence		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		.	L	G	L	R	F	V	L	L	R	G	G	A	T	Q	T	R	Q	L	E	A	D	L	P	T	A	L	R	P	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	Y	V	A	D	I	E	R	L	A	A	R	Y	H	D	A	S	P	R	A	M	R	R	V	V	M	A	P	.	.	.	.
Template Known Secondary structure		.	T	T											S				S		S	T	T	S		G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T				S	T	T		S								.	.	.	.
Template Predicted Secondary structure		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	I	D	I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	D	Y	V	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	.	G	V	R	P	H	L	Y	C	L	P	I
Query Conservation																																																																						.
Alig confidence																				.	.											.																																						.
Template Conservation																				.	.											.
Template Sequence		T	T	V	L	Y	S	I	S	P	R	E	M	R	E	T	A	A	V	.	.	A	R	R	L	G	L	R	M	H	S	.	H	L	S	G	K	S	P	V	A	F	C	G	E	H	D	W	L	G	S	D	V	W	Y	A	H	L	V	K	V	D	A	D	E	I	A	L	L	A	Q	T	G	T	G	V	A	H	C	P	Q
Template Known Secondary structure		T	T	T	T	T	S	S												.	.				T	T						.														T	T			S	T	T					S			S													T
Template Predicted Secondary structure																				.	.											.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	.	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y
Query Conservation																																																												.
Alig confidence															.	.	.						.								.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation															.	.	.						.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	G	R	L	P	V	R	E	M	A	D	A	.	.	.	G	V	P	V	S	.	I	G	V	D	G	A	A	.	.	.	.	.	.	.	.	.	.	.	S	N	E	A	A	D	M	I	S	E	V	H	M	T	W	L	A	Q	R	A	R	L	A	S	I	A	E	V	I	H	W	G	T	A	G	G	A	R	V	M
Template Known Secondary structure									T	T					.	.	.	T					.								.	.	.	.	.	.	.	.	.	.	.			S			S															T												T
Template Predicted Secondary structure															.	.	.						.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.		.	.	330	.	.	.	.												.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		305	.										.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		G	L	.	.	.	.	.	.	.	.	.	P	V	N	D	T	F	I	E	L	V	R	E
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	D	E	V	G	K	V	A	V	G	Y	A	A	D	I	A	V	Y	R	L	D	D
Template Known Secondary structure		T		T	T	S	S			S	T	T	S	B										S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions