Job Description P05020 Confidence 100.00% Date Thu Jan 5 10:58:35 GMT 2012 Rank 26 Aligned Residues 327 % Identity 18% Template c2gwnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydroorotase; PDBTitle: the structure of putative dihydroorotase from porphyromonas2 gingivalis. Resolution 1.85 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	L	H	L	R	D	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	L	R	L	F	P	G	C	I	D	D	Q	V	H	F	R	E	P	G	L	T	H	K	A	T	I	A	S	E	S	R	A	A	V	A	G	G	V	T	S	F	X	D	X	P	N	T	N	P	P	T	T	X	W	E	R	L	L	E	K	R	Q	I	G	A	D	T	A	W	A	N	Y	G	F	F	F	G	G	T
Template Known Secondary structure		T	T																T	T	T		T	T	T													T	T								S		S	S	S		S		S																S	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.															.																	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation		.	.	.	.	.															.																	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	N	D	N	I	D	E	I	K	R	V	D	K	H	L	.	V	P	G	L	L	F	L	G	S	S	T	G	N	X	L	V	.	.	.	.	.	.	D	N	K	E	T	L	E	K	I	F	G	E	C	D	L	L	I	A	T	H	C	E	K	E	E	I	I	R	A	N	K	E	H	Y	K	A	K	Y
Template Known Secondary structure		.	.	.	.	.	S	S							T			T	T	S	.		S				B	S	S	S			G	G	G	B		.	.	.	.	.	.															S					B
Template Predicted Secondary structure		.	.	.	.	.															.																	.	.	.	.	.	.
Template SS confidence
							131	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
																	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	D	Y	V	.	.	.	.	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		G	N	D	L	D	I	H	F	H	P	L	I	R	S	E	E	A	C	Y	R	S	S	A	E	A	V	E	L	A	E	R	X	N	A	R	L	H	I	L	H	L	S	T	E	K	E	L	S	L	F	R	N	D	I	P	T	A	Q	K	R	I	T	S	E	V	C	V	H	H	L	W	F	S	D	T	D	Y	G	R	L
Template Known Secondary structure			S				G	G	G					S																				T											T	G	G	G	G	G	S			S	S		G	G	G		S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.
Predicted Secondary structure																																																			.	.																					.
Query SS confidence																																																			.	.																					.
Query Sequence		G	V	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	.	.	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	.	E	E	M	N	A	L	Q	H
Query Conservation																																																			.	.																					.
Alig confidence			.	.																														.																	.	.																					.
Template Conservation			.	.																														.
Template Sequence		G	.	.	N	R	I	K	W	N	P	A	I	K	K	E	S	D	R	E	A	L	R	A	A	V	R	N	G	R	I	D	I	.	I	A	T	D	H	A	P	H	L	L	R	E	K	E	G	S	C	L	Q	A	A	S	G	G	P	L	V	Q	H	S	L	L	A	L	L	E	L	C	N	Q	G	I	F	S	I	E	E
Template Known Secondary structure		G	.	.	G	G	G			S	S																		S	S	S			.					B										S		T	T	T	S							T	T	T											T	T	S	S
Template Predicted Secondary structure			.	.																														.
Template SS confidence
		280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.										.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	.	.	.	.	.	.	.	.	.	P	V	N	D	T	F	I	E	L	V	R	E	E	Q	Q	V	A	E	S	I	A	L	T	D	D	T	L	V	P	F	L	A	G	E	T	V	R	W	S	V	K
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																															.
Template Conservation																																																								.
Template Sequence		I	V	S	K	T	A	H	I	P	A	T	L	F	A	I	E	K	R	G	Y	I	R	P	G	Y	Y	A	D	L	V	L	V	D	P	S	S	P	H	T	V	S	A	D	N	I	L	S	L	C	G	W	S	P	F	.	E	G	F	T	F	S	H	S	V	A
Template Known Secondary structure							T								T	B	T	T		S	S			T	T	S	B								T	T	S						T	T	T			S	T	T				T	T	.	T	T				S
Template Predicted Secondary structure																																																								.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions