Job Description P05020 Confidence 100.00% Date Thu Jan 5 10:58:35 GMT 2012 Rank 17 Aligned Residues 335 % Identity 16% Template c2gseC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydropyrimidinase-related protein 2; PDBTitle: crystal structure of human dihydropyrimidinease-like 2 Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.									.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	L	H	L	R	D	.	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																																													.	.
Template Conservation																																																																								.	.
Template Sequence		H	S	R	M	V	I	P	G	G	I	D	V	H	T	R	F	Q	M	P	D	Q	G	M	T	S	A	D	D	F	F	Q	G	T	K	A	A	L	A	G	G	T	T	M	I	I	D	H	V	V	P	E	P	G	T	S	L	L	A	A	F	D	Q	W	R	E	W	A	D	S	K	.	.	S	C	C	D	Y	S	L	H
Template Known Secondary structure		T	T														T	T				T	T				S	S													T												T	T	S																	.	.		S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	T	C	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D	I	F	D	R	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																			.	.	.	.																																									.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		V	D	I	S	E	W	H	K	G	I	Q	E	E	M	E	A	L	V	K	D	H	G	V	N	S	F	L	V	Y	M	A	F	K	.	.	.	.	D	R	F	Q	L	T	D	C	Q	I	Y	E	V	L	S	V	I	R	D	I	G	A	I	A	Q	V	H	A	E	N	G	D	I	I	A	E	E	Q	Q	R	I	L	D
Template Known Secondary structure					S				T	T												S									S	S	S	T	.	.	.	.	T	T	T	B																T	T								S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
																	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	D	Y	V	.	.	.	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation
Template Sequence		L	G	I	T	G	P	E	G	H	V	L	S	R	P	E	E	V	E	A	E	A	V	N	R	A	I	T	I	A	N	Q	T	N	C	P	L	Y	I	T	K	V	M	S	K	S	S	A	E	V	I	A	Q	A	R	K	K	G	T	V	V	Y	G	E	P	I	T	A	S	L	G	T	D	G	S	H	Y	W	S	K	N
Template Known Secondary structure		T	T			S	T							S																				T										S													T	T								B								G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		216			.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.
Predicted Secondary structure			.	.													.																																	.	.	.	.	.																								.	.
Query SS confidence			.	.													.																																	.	.	.	.	.																								.	.
Query Sequence		V	.	.	R	P	H	L	Y	C	L	P	I	L	K	R	.	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	.	.	.	.	.	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	.	.	E	E
Query Conservation			.	.													.																																	.	.	.	.	.																								.	.
Alig confidence			.	.													.																			.														.	.	.	.	.																								.	.
Template Conservation																																				.
Template Sequence		W	A	K	A	A	A	F	V	T	S	P	P	L	S	P	D	P	T	T	P	D	F	L	N	S	L	L	S	C	G	D	L	Q	V	.	T	G	S	A	H	C	T	F	N	T	A	Q	K	A	V	G	K	D	N	F	T	L	I	P	E	G	T	N	G	T	E	E	R	M	S	V	I	W	D	K	A	V	V	T	G
Template Known Secondary structure								T			S	S				S		T	T												T	S	S			.		B			B									G	G	G	T	T		G	G	G	S				B			T	T	T										T	T	T	S
Template Predicted Secondary structure																																				.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.											.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G	P	Q	F	Y	G	L	P	V	.	.	.	.	.	.	.	.	.	.	N	D	T	F	I	E	L	V	R	E	E	Q	Q	V	A	E	S	I	A	L	T	D	D	T	L	V	P	F	L	A	G	E	T	V	R	W	S	V	K
Query Conservation																									.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																																																																.
Template Sequence		K	M	D	E	N	Q	F	V	A	V	T	S	T	N	A	A	K	V	F	N	L	Y	P	R	K	G	R	I	A	V	G	S	D	A	D	L	V	I	W	D	P	D	S	V	K	T	I	S	A	K	T	H	N	S	S	L	E	Y	N	I	F	E	.	G	M	E	C	R	G	S	P	L
Template Known Secondary structure		S	S										T								T		T	T	T	S	S			S	T	T	S	B																T	T	T	S	S	S	S		S			T	T	T	.	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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