Job Description P0A9V1 Confidence 100.00% Date Thu Jan 5 11:11:27 GMT 2012 Rank 23 Aligned Residues 218 % Identity 33% Template c3d31B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	A	K	N	L	A	K	A	Y	K	G	R	R	V	V	E	D	V	S	L	T	V	N	S	G	E	I	V	G	L	L	G	P	N	G	A	G	K	T	T	T	F	Y	M	V	V	G	I	V	P	R	D	A	G	N	I	I	I	D	D	D	D	I	S	L	L	P	L	H	A	R	A	R	R	G	I	G	Y
Query Conservation
Alig confidence																.																																																												.	.	.
Template Conservation																.																																																												.	.	.
Template Sequence		M	I	E	I	E	S	L	S	R	K	W	K	N	F	.	S	L	D	N	L	S	L	K	V	E	S	G	E	Y	F	V	I	L	G	P	T	G	A	G	K	T	L	F	L	E	L	I	A	G	F	H	V	P	D	S	G	R	I	L	L	D	G	K	D	V	T	D	L	S	P	E	K	H	D	.	.	.	I	A	F
Template Known Secondary structure													S	S		.											T	T										T												T	S	S			S							T	T				T	T	S						T	.	.	.
Template Predicted Secondary structure																.																																																												.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Q	E	A	S	I	F	R	R	L	S	V	Y	D	N	L	M	A	V	L	Q	I	R	D	D	L	S	A	E	Q	R	E	D	R	A	N	E	L	M	E	E	F	H	I	E	H	L	R	D	S	M	G	Q	S	L	S	G	G	E	R	R	R	V	E	I	A	R	A	L	A	A	N	P	K	F	I	L	L	D
Query Conservation
Alig confidence																																	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		V	Y	Q	N	Y	S	L	F	P	H	M	N	V	K	K	N	L	E	F	G	M	R	M	K	K	I	K	D	P	K	R	.	.	.	.	V	L	D	T	A	R	D	L	K	I	E	H	L	L	D	R	N	P	L	T	L	S	G	G	E	Q	Q	R	V	A	L	A	R	A	L	V	T	N	P	K	I	L	L	L	D
Template Known Secondary structure				T	T					T	T	S																					.	.	.	.								T	T		T	T	T	T	T	S		G	G	G	S														T	T	S			S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		E	P	F	A	G	V	D	P	I	S	V	I	D	I	K	R	I	I	E	H	L	.	R	D	S	G	L	G	V	L	I	T	D	H	N	V	R	E	T	L	A	V	C	E	R	A	Y	I	V	S	Q	G	H	L	I	A	H	G	T	P	T	E	I	L	Q	D	E
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		E	P	L	S	A	L	D	P	R	T	Q	E	N	A	R	E	M	L	S	V	L	H	K	K	N	K	L	T	V	L	H	I	T	H	D	Q	T	E	A	R	I	M	A	D	R	I	A	V	V	M	D	G	K	L	I	Q	V	G	K	P	E	E	I	F	E	K	P
Template Known Secondary structure		S	S	S	T	T	S																			T	T								S										S						S	S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions