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Job DescriptionP0A9V1
Confidence95.86%DateThu Jan 5 11:11:27 GMT 2012
Rank292Aligned Residues128
% Identity16%Templatec3b9qA_
PDB info PDB header:protein transportChain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  DVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLM
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Template Sequence  ELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S



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   156...160.........170.........180.........190.........200....
 
   101........110.........120.........130.........140.........150.........160..... ....170.........
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Query Sequence  AVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPF. AGVDPISVIDIKRI
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Template Sequence  . . . . . . . . . . . . . . AAASDQLEIWAERTGCEIVVAEKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIAC
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   205....210.........220.........230.........240.........250.........260.........270
 
   180.... .....190...
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Query Sequence  IEHLR. . . . DSGLGVLIT
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Template Sequence  KKAVGKIVSGAPNEILLV
Template Known Secondary structure  TTSTT

S
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   273......280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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