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Job DescriptionP0A9V1
Confidence97.15%DateThu Jan 5 11:11:27 GMT 2012
Rank132Aligned Residues127
% Identity20%Templatec2ja1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor.
Resolution2.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  NSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIR
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Template Sequence  QNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEH. . . . . . . .
Template Known Secondary structure 


STTSSTT

TT

SS
SS
TTS

SSGGGGGGG........
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   6...10.........20.........30.........40.........50.........60.........70.......
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  DDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ITEELDVIAIDEV. QFFDGD. . . . IVEVVQVLANR
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SS

SSG.GGS
TT....T
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   78.80.........90 ...... ...100.......
 
   187..190.... .....200.........210.
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Query Sequence  GLGVLITD. . . . . . . . . . HNVRETLAVCERAYIVS
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Template Sequence  GYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQ
Template Known Secondary structure  T
SB
TTS
B
SS
S

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   108.110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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