Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9V1
Confidence95.89%DateThu Jan 5 11:11:27 GMT 2012
Rank287Aligned Residues128
% Identity19%Templatec2j37W_
PDB info PDB header:ribosomeChain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
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Query Sequence  SLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
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Template Sequence  AWTPTKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   93......100.........110.........120.........130.........140
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEH
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Template Sequence  . . . . . . . . . . GAFDQLKQNATKARIPFYGSYTEM. . DPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVAN
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   143......150.........160...... ...170.........180.........190.........200.........210
 
   183......190....
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Query Sequence  LRDSGLGVLITD
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Template Sequence  AIQPDNIVYVMD
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   211........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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