Job Description P0A9V1 Confidence 100.00% Date Thu Jan 5 11:11:27 GMT 2012 Rank 4 Aligned Residues 231 % Identity 30% Template c2it1B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii Resolution 1.94 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	A	K	N	L	A	K	A	Y	K	G	R	R	V	V	E	D	V	S	L	T	V	N	S	G	E	I	V	G	L	L	G	P	N	G	A	G	K	T	T	T	F	Y	M	V	V	G	I	V	P	R	D	A	G	N	I	I	I	D	D	D	D	I	S	L	L	P	L	H	A	R	A	R	R	G	I	G	Y
Query Conservation
Alig confidence																																																																											.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		E	I	K	L	E	N	I	V	K	K	F	G	N	F	T	A	L	N	N	I	N	L	K	I	K	D	G	E	F	M	A	L	L	G	P	S	G	S	G	K	S	T	L	L	Y	T	I	A	G	I	Y	K	P	T	S	G	K	I	Y	F	D	E	K	D	V	T	E	L	P	P	K	D	R	.	.	.	N	V	G	L
Template Known Secondary structure													T	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S						.	.	.	T
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Q	E	A	S	I	F	R	R	L	S	V	Y	D	N	L	M	A	V	L	Q	I	R	D	D	L	S	A	E	Q	R	E	D	R	A	N	E	L	M	E	E	F	H	I	E	H	L	R	D	S	M	G	Q	S	L	S	G	G	E	R	R	R	V	E	I	A	R	A	L	A	A	N	P	K	F	I	L	L	D
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		V	F	Q	N	W	A	L	Y	P	H	M	T	V	Y	K	N	I	A	F	P	L	E	L	R	.	K	A	P	R	E	E	I	D	K	K	V	R	E	V	A	K	M	L	H	I	D	K	L	L	N	R	Y	P	W	Q	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	V	K	E	P	E	V	L	L	L	D
Template Known Secondary structure				T	T					T	T	S													T	.	T																	T	T		G	G	G	T	T	S		G	G	G	S															T	T			S
Template Predicted Secondary structure																										.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																														.	.
Query SS confidence																							.																																														.	.
Query Sequence		E	P	F	A	G	V	D	P	I	S	V	I	D	I	K	R	I	I	E	H	L	.	R	D	S	G	L	G	V	L	I	T	D	H	N	V	R	E	T	L	A	V	C	E	R	A	Y	I	V	S	Q	G	H	L	I	A	H	G	T	P	T	E	I	L	Q	D	E	.	.	H	V	K	R	V	Y	L	G	E
Query Conservation																							.																																														.	.
Alig confidence																							.																																														.	.
Template Conservation
Template Sequence		E	P	L	S	N	L	D	A	L	L	R	L	E	V	R	A	E	L	K	R	L	Q	K	E	L	G	I	T	T	V	Y	V	T	H	D	Q	A	E	A	L	A	M	A	D	R	I	A	V	I	R	E	G	E	I	L	Q	V	G	T	P	D	E	V	Y	Y	K	P	K	Y	K	F	V	G	G	F	L	G	N
Template Known Secondary structure		S	G	G	G	G	S																				T								S										S							T	T														S		S	B							S	B	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions