Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9V1
Confidence97.25%DateThu Jan 5 11:11:27 GMT 2012
Rank121Aligned Residues129
% Identity14%Templatec2cvhB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
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Query Sequence  VNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQI
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Template Sequence  FAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEGGFSPERLVQMAETR. . . . . . . . . . . . . GLNPEEALS. . . . .
Template Known Secondary structure  B
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   17..20.........30.........40.........50.........60......... 70........
 
   106...110.........120.........130.........140.........150.........160........ .170.......
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Query Sequence  RDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGV. . . . . . . . DPISVIDIK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . RFILFTPSDFKEQRRVIGSLKKTVDSNFALVVVDSITAHYRAEENRSGLIAELSRQL
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   7980.........90.........100.........110.........120.........130.....
 
   178.180... ......190.....
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Query Sequence  RIIEHL. RDSGLGVLITDH
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Template Sequence  QVLLWIARKHNIPVIVINQ
Template Known Secondary structure  T


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   136...140.........150....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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