Job Description P0A9V1 Confidence 98.37% Date Thu Jan 5 11:11:27 GMT 2012 Rank 89 Aligned Residues 109 % Identity 22% Template c1wbdA_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of e. coli dna mismatch repair enzyme2 muts, e38q mutant, in complex with a g.t mismatch Resolution 2.40 Å

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		23	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure										.																					.	.	.	.	.	.	.	.	.
Query SS confidence										.																					.	.	.	.	.	.	.	.	.
Query Sequence		S	L	T	V	N	S	G	E	.	I	V	G	L	L	G	P	N	G	A	G	K	T	T	T	F	Y	M	V	V	.	.	.	.	.	.	.	.	.	G	I	V	P	R	D	A	G	N	I	I	I	D	D	D	D	I	S	L	L	P	L	H	A	R	A	R	R	G	I	G	Y	L	P	Q	E	A	S	I	F	R	R
Query Conservation										.																					.	.	.	.	.	.	.	.	.
Alig confidence										.																					.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	N	L	S	P	Q	R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	V	E	I	G	P	I	D	R	I	F	T	R	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	S									T	T	S	S																T	T	T			B	S	S	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		L	S	V	Y	D	N	L	M	A	V	L	Q	I	R	D	D	L	S	A	E	Q	R	E	D	R	A	N	E	L	M	E	E	F	H	I	E	H	L	R	D	S	M	G	Q	S	L	S	G	G	E	R	R	R	V	E	I	A	R	A	L	A	A	N	P	K	F	I	L	L	D	E	P	F	A	G	V	D	P	.	I
Query Conservation																																																																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	M	V	E	M	T	E	T	A	N	I	L	H	N	A	T	E	Y	S	L	V	L	M	D	E	I	G	R	G	T	S	T	Y	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T							S					S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		S	V	I	D	I	K	R	I	I	E	H	L	R	D	S	.	G	L	G	V	L	I	T	D	H	N	V	R
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		G	L	S	L	A	W	A	C	A	E	N	L	A	N	K	I	K	A	L	T	L	F	A	T	H	Y	F	E
Template Known Secondary structure																T	T									S		G	G
Template Predicted Secondary structure
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions