Job Description P0A9V1 Confidence 100.00% Date Thu Jan 5 11:11:27 GMT 2012 Rank 18 Aligned Residues 222 % Identity 29% Template c1q1bD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	K	N	L	A	K	A	Y	K	G	R	R	V	V	E	D	V	S	L	T	V	N	S	G	E	I	V	G	L	L	G	P	N	G	A	G	K	T	T	T	F	Y	M	V	V	G	I	V	P	R	D	A	G	N	I	I	I	D	D	D	D	I	S	L	L	P	L	H	A	R	A	R	R	G	I	G	Y	L
Query Conservation
Alig confidence																																																																								.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		V	Q	L	Q	N	V	T	K	A	W	G	E	V	V	V	S	K	D	I	N	L	D	I	H	E	G	E	F	V	V	F	V	G	P	S	G	C	G	K	S	T	L	L	R	M	I	A	G	L	E	T	I	T	S	G	D	L	F	I	G	E	K	R	M	N	D	T	P	P	A	.	.	.	E	R	G	V	G	M	V
Template Known Secondary structure												T	T													T	T								S	G	G	G	S								T	T	T	S	S				S	S					T	T				T	T			S	S	.	.	.	T	T					B
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	E	A	S	I	F	R	R	L	S	V	Y	D	N	L	M	A	V	L	Q	I	R	D	D	L	S	A	E	Q	R	E	D	R	A	N	E	L	M	E	E	F	H	I	E	H	L	R	D	S	M	G	Q	S	L	S	G	G	E	R	R	R	V	E	I	A	R	A	L	A	A	N	P	K	F	I	L	L	D	E
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		F	Q	S	Y	A	L	Y	P	H	L	S	V	A	E	N	M	S	F	G	L	K	L	A	.	G	A	K	K	E	V	I	N	Q	R	V	N	Q	V	A	E	V	L	Q	L	A	H	L	L	D	R	K	P	K	A	L	S	G	G	Q	R	Q	R	V	A	I	G	R	T	L	V	A	E	P	S	V	F	L	L	D	E
Template Known Secondary structure			S						T	T	S						T	T	T	T	T	T	S	S	.	S	S	T	T	T	T	T	T	T					T	T	G	G	G	T		T	T		S	S					G	G	G	T	T	T	S	S	S	S	T	T					T	T			S				B	S	S
Template Predicted Secondary structure																									.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		P	F	A	G	V	D	P	I	S	V	I	D	I	K	R	I	I	E	H	L	.	R	D	S	G	L	G	V	L	I	T	D	H	N	V	R	E	T	L	A	V	C	E	R	A	Y	I	V	S	Q	G	H	L	I	A	H	G	T	P	T	E	I	L	Q	D	E	H
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		P	L	S	N	L	D	A	A	L	R	V	Q	M	R	I	E	I	S	R	L	H	K	R	L	G	R	T	M	I	Y	V	T	H	D	Q	V	E	A	M	T	L	A	D	K	I	V	V	L	D	A	G	R	V	A	Q	V	G	K	P	L	E	L	Y	H	Y	P	A
Template Known Secondary structure		T	T	T	T			T	T	T															T	T								S										S							T	T														S		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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