Job Description P33590 Confidence 100.00% Date Thu Jan 5 11:52:15 GMT 2012 Rank 6 Aligned Residues 486 % Identity 24% Template d1jeta_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	H	A	A	A	P	D	E	I	T	T	A	W	P	V	N	V	G	P	L	N	P	H	L	Y	T	P	.	N	Q	M	F	A	Q	S	M	V	Y	E	P	L	V	K	Y	Q	A	D	G	S	V	I	P	W	L	A	K	S	W	T	H	S	E	D	G	K	T	W	T	F	T	L	R	D	D	V	K	F	S	N	G
Query Conservation																													.
Alig confidence																													.																																.
Template Conservation																																																													.
Template Sequence		V	Q	L	A	D	K	Q	T	L	V	R	N	N	G	S	E	V	Q	S	L	D	P	H	K	I	E	G	V	P	E	S	N	V	S	R	D	L	F	E	G	L	L	I	S	D	V	E	G	H	P	S	P	G	V	A	E	K	W	E	.	N	K	D	F	K	V	W	T	F	H	L	R	E	N	A	K	W	S	D	G
Template Known Secondary structure				B		S	S								S	S			S		S	S	T	T	S			S														S					T	T						S	S						.			T	T	T								T	T		B		T	T	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	F	D	A	E	A	A	A	E	N	F	R	A	V	L	D	N	R	Q	R	H	A	W	L	E	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	I	V	D	V	K	A	L	S	K	T	E	L	Q	I	T	L	K	S	A	Y	Y	P	F	L	Q	E	L	A	L	P	R	P	F
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	V	T	A	H	D	F	V	Y	S	W	Q	R	L	A	D	P	N	T	A	S	P	Y	A	S	Y	L	Q	Y	G	H	I	A	N	I	D	D	I	I	A	G	K	K	P	A	T	D	L	G	V	K	A	L	D	D	H	T	F	E	V	T	L	S	E	P	V	P	Y	F	Y	K	L	L	V	H	P	S	V	S
Template Known Secondary structure			B																G	G	G			T	T	T	T					T	T	B	T	T						T	T	S	S		G	G	G	S	S						T	T						B	S	S			T	T					T	T	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		R	F	I	A	P	S	Q	F	K	N	H	E	T	M	N	G	I	K	A	P	I	G	T	G	P	W	I	L	Q	E	S	K	L	N	Q	Y	D	V	F	V	R	N	E	N	Y	W	G	.	E	K	P	A	I	K	K	I	T	F	N	V	I	P	D	P	T	T	R	A	V	A	F	E	T	G	D	I	D	L	L	Y
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		P	V	P	K	S	A	V	E	K	F	G	D	K	W	T	Q	P	A	N	I	V	T	N	G	A	Y	K	L	K	N	W	V	V	N	E	R	I	V	L	E	R	N	P	Q	Y	W	D	N	A	K	T	V	I	N	Q	V	T	Y	L	P	I	S	S	E	V	T	D	V	N	R	Y	R	S	G	E	I	D	M	T	Y
Template Known Secondary structure												G	G	G	T	T	S	T	T	T					S	S								T	T	T								T	T	S	T	T	G	G	G																							T	T	S		S	B
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	E	G	L	L	P	L	D	T	F	A	R	F	S	Q	N	P	A	Y	H	T	Q	L	S	Q	P	I	E	T	V	M	L	A	L	N	T	A	K	A	P	T	N	E	L	A	V	R	E	A	L	N	Y	A	V	N	K	K	S	L	I	D	N	A	L	Y	G	T	Q	Q	V	A	D	T	L	F	A	P	S	V
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		N	.	.	.	N	M	P	I	E	L	F	Q	K	L	K	K	E	I	P	N	E	V	R	V	D	P	Y	L	C	T	Y	Y	Y	E	I	N	N	Q	K	A	P	F	N	D	V	R	V	R	T	A	L	K	L	A	L	D	R	D	I	I	V	N	K	V	K	N	Q	G	D	L	P	A	Y	S	Y	T	P	P	Y	T
Template Known Secondary structure		S	.	.	.				T	T	T								S	G	G	G																T	T	S	T	T	T	T	S											S								T	T	T		S	S					S	S	S	S		T	T	S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		246				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		321	.	.	.	.	.	.	.						.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		P	Y	A	N	L	G	L	K	.	.	.	.	.	P	S	Q	Y	D	P	Q	K	A	K	A	L	L	E	K	A	G	W	T	L	P	A	G	K	D	I	R	E	K	N	G	Q	P	L	R	I	E	L	S	F	I	G	T	D	A	L	S	K	S	M	A	E	I	I	Q	A	D	M	R	Q	I	G	A	D	V	S	L
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	A	K	L	V	E	P	E	W	F	K	W	S	Q	Q	K	R	N	E	E	A	K	K	L	L	A	E	A	G	F	.	.	.	.	.	.	.	.	.	.	T	A	D	K	P	L	T	F	D	L	L	Y	N	T	S	D	L	H	K	K	L	A	I	A	V	A	S	I	W	K	K	N	L	G	V	N	V	N	L
Template Known Secondary structure		T	T											S																T	T		.	.	.	.	.	.	.	.	.	.		S	S	S										S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.											.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	E	E	E	S	S	I	Y	A	R	Q	R	D	G	R	F	G	M	I	F	H	R	T	W	G	A	P	Y	D	P	H	A	F	L	S	S	M	R	V	P	S	H	A	D	F	Q	A	Q	Q	G	L	A	D	K	P	L	I	D	K	E	I	G	E	V	L	A	T	H	D	E	T	Q	R	Q	A	L	Y	R	D
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		E	N	Q	E	W	K	T	F	L	D	T	R	H	Q	G	T	F	D	V	A	R	A	G	W	C	A	D	Y	N	E	P	T	S	F	L	N	T	M	L	S	D	.	.	.	.	S	S	N	N	T	A	H	Y	K	S	P	A	F	D	K	L	I	A	D	T	L	K	V	A	D	D	T	Q	R	S	E	L	Y	A	K
Template Known Secondary structure																T			S									S	S	S	S	T					G	G	G	S	T	T	.	.	.	.		T	T		T	T														T	T	T	S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.					.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	T	R	L	H	D	E	A	V	Y	L	P	I	S	Y	I	S	M	M	V	V	S	K	P	E	L	G	N	I	P	Y	A	P	I	A	T	E	I	P	F	E	Q	I	K	P	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	Q	Q	L	D	K	D	S	A	I	V	P	V	Y	Y	Y	V	N	A	R	L	V	K	P	W	V	G	G	Y	T	G	K	D	P	L	D	N	I	Y	V	K	N	L	Y	I	I	K
Template Known Secondary structure									T	T														B		T	T			S						T	T					G	G	G				B
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.