Return to main results Retrieve Phyre Job Id

Job DescriptionP33590
Confidence71.53%DateThu Jan 5 11:52:15 GMT 2012
Rank38Aligned Residues56
% Identity13%Templatec3pppA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:glycine betaine/carnitine/choline-binding protein; PDBTitle: structures of the substrate-binding protein provide insights into the2 multiple compatible solutes binding specificities of bacillus3 subtilis abc transporter opuc
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   363......370.........380........ .390....... ..400.........410.........
Predicted Secondary structure 



.


..







Query SS confidence 

























.








. .





















Query Sequence  RIELSFIGTDALSKSMAEIIQADMRQ. IGADVSLIG. . EEESSIYARQRDGRFGMIFHRT
Query Conservation     
            
  
   
  . 

 
 
  ..               
      
Alig confidence 





.


















.








..





















Template Conservation   
 

 .  

   
 
 
    

   
  
              

  
 


     
Template Sequence  TIKIGA. QSMTESEIVANMIAQLIEHDTDLNTALVKNLGSNYVQHQAMLGGDIDISATRY
Template Known Secondary structure  .SS
S

STTS
S
Template Predicted Secondary structure 
.

















Template SS confidence 



























































   33..... .40.........50.........60.........70.........80.........90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions