Job Description P33590 Confidence 100.00% Date Thu Jan 5 11:52:15 GMT 2012 Rank 21 Aligned Residues 213 % Identity 23% Template c3o6pA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:peptide abc transporter, peptide-binding protein; PDBTitle: crystal structure of peptide abc transporter, peptide-binding protein Resolution 1.65 Å

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		267	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.									.	330	.	.	.	.	.	.
Predicted Secondary structure													.	.																																																				.	.	.	.	.	.	.	.
Query SS confidence													.	.																																																				.	.	.	.	.	.	.	.
Query Sequence		P	I	E	T	V	M	L	A	L	N	T	.	.	A	K	A	P	T	N	E	L	A	V	R	E	A	L	N	Y	A	V	N	K	K	S	L	I	D	N	A	L	Y	G	T	Q	Q	V	A	D	T	L	F	A	P	S	V	P	Y	A	N	L	G	L	K	.	.	.	.	.	.	.	.	P	S	Q	Y	D	P	Q	K
Query Conservation													.	.																																																				.	.	.	.	.	.	.	.
Alig confidence													.	.																																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	S	T	Q	Y	X	E	L	N	Q	R	D	E	K	S	P	F	R	N	A	N	L	R	K	A	I	S	Y	S	I	D	R	K	A	L	V	E	S	I	L	G	D	G	S	I	E	P	N	G	L	V	P	A	D	X	A	K	D	P	S	G	G	K	D	F	A	K	E	A	G	S	Q	I	E	Y	D	T	K	K
Template Known Secondary structure														S	T	T		G	G	G											T									T	T	T		S	S		B			S	S	S	S		T	T	S		B		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		A	K	A	L	L	E	K	A	G	W	T	L	P	A	G	K	D	I	R	E	K	N	G	Q	P	L	R	I	E	L	S	F	I	G	T	D	A	L	S	K	S	M	A	E	I	I	Q	A	D	M	R	Q	I	.	.	G	A	D	V	S	L	I	G	E	E	E	S	S	I	Y	A	R	Q	R	D	G	R	F	G	M
Query Conservation																																																							.	.
Alig confidence															.	.	.	.	.	.	.	.	.														.																		.	.
Template Conservation															.	.	.	.	.	.	.	.	.														.
Template Sequence		A	K	E	Y	W	E	K	A	K	K	E	L	G	.	.	.	.	.	.	.	.	.	I	S	T	L	T	X	D	I	L	S	S	D	A	.	D	S	S	K	K	T	V	E	F	V	Q	G	S	I	Q	D	A	L	D	G	V	K	V	T	V	S	P	V	P	F	S	V	R	L	D	R	S	N	K	G	D	F	D	A
Template Known Secondary structure														T	.	.	.	.	.	.	.	.	.		S											S	.																		S	T	T																				T			S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.														.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.										.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.			.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		I	F	H	R	T	W	G	A	P	Y	D	P	H	A	F	L	S	S	M	R	V	P	S	H	A	D	F	Q	A	Q	Q	G	L	A	D	K	P	L	I	D	K	E	I	G	E	V	L	A	.	.	T	H	D	E	T	Q	R	Q	A	L	Y	R	D	I	L	T	R	L	H	D	E	A	V	Y	L	P	I	S	Y	I
Query Conservation																																																		.	.
Alig confidence																					.	.	.	.																										.	.
Template Conservation																					.	.	.	.
Template Sequence		V	I	G	G	W	S	A	D	Y	A	D	P	S	S	F	L	D	L	F	.	.	.	.	A	S	D	N	S	Y	N	R	G	R	Y	N	N	A	E	F	D	K	F	V	K	A	A	S	S	A	D	A	T	D	P	E	K	R	W	D	D	X	L	N	A	E	K	T	I	X	G	D	X	G	V	V	P	L	F	Q	K
Template Known Secondary structure									S	S	S		T					G	G	G	.	.	.	.	S	T	T		T	T		T	T																S	T	T																					T	T	S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.					.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		493
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		526

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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