Job Description P33590 Confidence 35.21% Date Thu Jan 5 11:52:15 GMT 2012 Rank 68 Aligned Residues 76 % Identity 14% Template c3i6vA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic his/glu/gln/arg/opine family-binding protein; PDBTitle: crystal structure of a periplasmic his/glu/gln/arg/opine family-2 binding protein from silicibacter pomeroyi in complex with lysine Resolution 2.00 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	F	N	V	I	P	D	P	T	T	R	A	V	A	F	E	T	G	D	I	D	L	L	Y	G	N	E	G	L	L	P	L	D	T	F	A	R	F	S	Q	N	P	A	Y	H	T	Q	L	S	Q	P	I	E	T	V	M	L	A	L	N	T	A	K	A	P	T	N	E	L	A	V	R	E	A	L	N	Y	A	V
Query Conservation
Alig confidence																																	.																																.	.	.	.	.
Template Conservation																																	.																																.	.	.	.	.
Template Sequence		A	T	L	V	E	F	A	T	P	E	E	T	I	A	A	V	R	N	G	E	A	D	A	V	F	A	D	R	D	Y	L	.	V	P	I	V	A	E	S	G	G	E	L	M	F	V	G	D	D	V	P	L	G	G	G	V	G	M	G	L	R	E	S	.	.	.	.	.	D	G	E	L	R	G	K	F	D	A	A	I
Template Known Secondary structure		S						S	S										T	T	S	S	S										.							T	T	T	S	S										S	S								T	T	.	.	.	.	.
Template Predicted Secondary structure																																	.																																.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.
		296	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions