 |
Job Description | P33590 | Confidence | 95.31% | Date | Thu Jan 5 11:52:15 GMT 2012 |
Rank | 23 | Aligned Residues | 68 |
% Identity | 12% | Template | c3chgB_ |
PDB info |
PDB header:ligand binding protein | Chain: B: PDB Molecule:glycine betaine-binding protein; |
PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
|
Resolution | 2.80 Å |
|
 |
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | I | R | E | K | N | G | Q | P | L | R | I | E | L | S | F | I | G | T | D | A | L | S | K | S | M | A | E | I | I | Q | A | D | M | R | Q | I | G | A | D | V | S | L | I | G | E | E | E | S | S | I | Y | A | R | Q | R | D | G | R | F | G | M | I | F | H | R | T | W | G | A |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |
|   |   |
|   | . | . | . |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |
|   |
|   |
Template Sequence |   |
K | G | V | Q | K | V | K | G | D | K | I | N | . |
. |
. |
L | A | Y | V | A | W | D | S | E | I | A | S | T | N | V | I | G | K | V | L | E | D | L | G | Y | E | V | T | L | T | Q | V | E | A | G | P | M | W | T | A | I | A | T | G | S | A | D | A | S | L | S | A | W | L | P | N |
Template Known Secondary structure |   |
T | T |
|
|
|
| S | S |
|  |  |  | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|