Job Description P32719 Confidence 96.42% Date Thu Jan 5 11:50:42 GMT 2012 Rank 271 Aligned Residues 164 % Identity 15% Template d5ruba1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.70

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.													.
Predicted Secondary structure																					.						.	.	.	.	.																												.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.						.	.	.	.	.																												.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	.	.	.	.	.	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	.	L	A	T	K	P	L	D	C	H	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation																					.						.	.	.	.	.																												.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.						.	.	.	.	.							.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		S	A	N	I	T	A	D	D	P	F	E	I	I	A	R	G	E	Y	V	L	E	T	F	G	E	N	A	S	H	V	A	L	L	V	D	G	.	.	.	.	.	.	.	.	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	N	F	L	H	Y	H	R	A	G	H	G	A	V	T	S	P	Q	S	K
Template Known Secondary structure								S	S																G	G	G	G	G	G							T	.	.	.	.	.	.	.	.	T	T	S													T	T	S							T	T	T					S	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.									.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q
Query Conservation
Alig confidence																								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H	T	.	G	T	S	S	D	R	A	I	A	Y	M	L	T	Q	D	E	A	Q	G	P	F	Y	R	Q	S	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S														T		S					.															S					S	S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																													.		.
Query SS confidence																																													.		.
Query Sequence		P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	.	G	.	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A	A	K	S
Query Conservation																																													.		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	K	A	C	T	P	I	I	S	G	G	M	N	A	L	R	M	P	G	F	F	E	N	L	G	N	A	N	V	I	L	T	A	G	G	G	A	F	G	H	I	D	G	P	V	A	G	A	R	S	L	R	Q	A	W	Q	A	W	R	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														T	T	T									S										T	T	T	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		223	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	P
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions