|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | |
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
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|
|
|
|
|
|
|
|
|
| . |
. |
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|
|
|
|
|
|
| . |
. |
. |
|
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|
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|
|
Query Sequence |   |
C | M | D | L | L | K | F | K | E | Q | I | E | F | I | . |
D | S | H | A | D | Y | F | H | I | D | I | M | D | G | H | F | V | P | N | L | T | L | S | . |
. |
. |
. |
P | F | F | V | S | Q | V | K | K | L | A | T | . |
. |
K | P | L | D | C | H | L | M | . |
. |
. |
V | T | R | P | Q | D | Y | I | A | Q | L | A | R |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   | . |
|   |
|   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |
| . | . | . | . |   |   |   |
|   |   |
|
|   |   |   |   | . | . |   |   |
|
|
|
|
|   | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
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|
|
|
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|
|
| . | . | . | . |
|
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|
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|
|
| . | . |
|
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|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |   | . | . | . |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |
Template Sequence |   |
S | L | D | T | A | T | A | A | R | L | A | N | H | L | V | D | Q | G | C | D | G | L | V | V | S | . |
. |
. |
G | T | T | G | E | S | P | T | T | T | D | G | E | K | I | E | L | L | R | A | V | L | E | A | V | G | D | R | A | R | V | I | A | G | A | G | T | Y | D | T | A | H | S | I | R | L | A | K | A | C | A | A |
Template Known Secondary structure |   |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | . | . | . | S | T | T | T | T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
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|
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|
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|
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|
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|
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|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
. | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | A | D | F | I | T | L | H | P | E | T | . |
. |
. |
. |
I | N | G | Q | A | F | R | L | I | D | E | I | R | R | . |
H | D | M | K | V | G | L | I | L | N | P | E | . |
. |
. |
. |
. |
T | P | V | E | A | M | K | Y | Y | I | H | K | A | D | K | I | T | V | M | T | V | D | P | G | F | A | G | Q | P | F | I | P |
Query Conservation |   |
|
|
|
|   |
|   |
|
|   |
|   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   | . |   |
|   |
|   |   |
|   |
|   |
|   | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|
|   |
|   |
Template Sequence |   |
E | G | A | H | G | L | L | V | V | T | P | Y | Y | S | K | P | P | Q | R | G | L | Q | A | H | F | T | A | V | A | D | A | T | E | L | P | M | L | L | Y | D | I | P | G | R | S | A | V | P | I | E | P | D | T | I | R | A | L | A | S | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | N | I | V | G | V | K | D | A | K |
Template Known Secondary structure |   |
 | T |
| S |  |  |  |  |  |
|
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|  |  |  |  |  |
|  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  |  | T | S | . | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 170 | . | . | . | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | L | D | K | L | A | E | L | K | A | W | R | E | R | E | G | L | E | Y | E | I | E | V | D | G | S | C | N | Q | A | T | Y | E | K | L | M | A | A | G | A | D | V | F | I | V | G | T | S | G | L | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | H | A | E | N | I | D | E | A | W | R | I | M | T | A | Q | I | L |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |
| . |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
A | D | L | H | S | G | A | Q | I | M | A | D | . |
. |
. |
. |
. |
. |
. |
T | G | L | A | Y | Y | S | G | D | D | . |
A | L | N | L | P | W | L | A | M | G | A | T | G | F | I | S | V | I | A | H | L | A | A | G | Q | L | R | E | L | L | S | A | F | G | S | G | D | I | A | T | A | R | K | I | N | I | A | V | A | P |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|  |  |  |  |
| S | G | . | G | G |  |  |  |  |  |  |  | T |
|
|  |  |  |  | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
  |
  |   |
219 | 220 | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
A | A | K |
Query Conservation |   |
  |
|   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
L | C | N |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
247 | . | . |
  |