Job Description P32719 Confidence 82.08% Date Thu Jan 5 11:50:42 GMT 2012 Rank 410 Aligned Residues 135 % Identity 21% Template d1vkfa_ SCOP info TIM beta/alpha-barrel GlpP-like GlpP-like Resolution 1.65

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	D	.	.	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A
Query Conservation																						.	.
Alig confidence																						.	.														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	F	L	L	K	S	D	I	L	N	L	K	F	H	L	K	I	L	K	D	R	G	K	T	V	F	V	D	X	D	F	V	N	G	.	.	.	.	.	L	G	E	G	E	E	A	I	L	F	V	K	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A
Template Known Secondary structure										T	T	T											T	T							G	G	G			T	.	.	.	.	.			S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																					.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70																									.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.									.	.
Query SS confidence																																								.	.									.	.
Query Sequence		D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	.	.	E	A	M	K	Y	Y	I	H	.	.	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L
Query Conservation																																								.	.									.	.
Alig confidence							.	.	.	.	.	.	.																											.	.									.	.									.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation							.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Sequence		D	G	I	I	T	.	.	.	.	.	.	.	I	K	P	K	N	Y	V	V	A	K	K	N	G	I	P	A	V	L	R	F	F	A	L	D	S	K	A	V	E	R	G	I	E	Q	I	E	T	L	G	V	D	V	V	E	V	L	.	.	.	.	.	.	.	.	.	.	.	P	G	A	V	A	P	K	V	.	.	.
Template Known Secondary structure		S					.	.	.	.	.	.	.	S											T	T											S															T		S						.	.	.	.	.	.	.	.	.	.	.	S	G	G	G					.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template SS confidence
		73	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.												.	.	.	.	.	.	130	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F
Query Conservation
Alig confidence		.	.	.																										.
Template Conservation		.	.	.																										.
Template Sequence		.	.	.	A	R	K	I	P	G	R	T	V	I	A	A	G	L	V	E	T	E	E	E	A	R	E	I	L	.	K	H	V	S	A	I
Template Known Secondary structure		.	.	.		T	T	S	T	T	S						S				S								T	.	T	T	S	S
Template Predicted Secondary structure		.	.	.																										.
Template SS confidence
					132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions