Job Description P32719 Confidence 95.72% Date Thu Jan 5 11:50:42 GMT 2012 Rank 289 Aligned Residues 210 % Identity 11% Template d1svda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.80

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		10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.
Predicted Secondary structure												.															.	.										.	.	.															.	.																	.	.	.
Query SS confidence												.															.	.										.	.	.															.	.																	.	.	.
Query Sequence		M	D	L	L	K	F	K	E	Q	I	.	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	.	.	M	D	G	H	F	V	P	N	L	.	.	.	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	.	.	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	.	.	.	I	A	Q	L	A	R
Query Conservation												.															.	.										.	.	.															.	.																	.	.	.
Alig confidence												.															.	.										.	.	.															.	.																	.	.	.
Template Conservation
Template Sequence		L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	V	Q	D	A	T	E	T	A	E	A	Q	T	G	E	R	K	G	H	Y	L	N	V	T	A	P	T	P	E	E	M	Y	K	R	A	E	F	A	K	E
Template Known Secondary structure																	T	T		S						T	T		S	S	B	T	T	B																					S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																										.																			.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																										.																			.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	.	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	.	.	.	.	.	.	.	.	.	.	A	M	K	Y	Y	I	H	K	.	.	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P
Query Conservation																										.																			.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence																										.																			.	.	.	.	.	.	.	.	.	.									.	.						.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		I	G	A	P	I	I	M	H	D	Y	I	T	G	G	F	T	A	N	T	G	L	A	K	W	C	Q	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	N	P	N	H	G	I	H	F	R	V	L	T	K	I	L	R	L	S	G	G	D	H	L	H	.	.	.	.	.	T	G	T	V	V	G	K
Template Known Secondary structure			T								T	T	T	T																T								T	T						S		T	T	S	S																S				.	.	.	.	.				S	T	T	S
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	.	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation			.
Template Sequence		L	.	E	G	D	R	A	S	T	L	G	W	I	D	L	L	R	E	S	F	I	P	E	D	R	S	R	G	I	F	F	D	Q	D	W	G	S	M	P	G	V	F	A	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	N	I	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	G	H	P	W	G	N
Template Known Secondary structure			.	G	G	G														S					B	G	G	G	T	B		S					T	T										S	S			G	G	G										S	S						S					T		T	T
Template Predicted Secondary structure			.
Template SS confidence
		328		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	W	R	I	M	T	A	Q	I	L	A	A	K	S	E	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	G	A	A	A	N	R	V	A	L	E	A	C	V	E	A	R	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions