Job Description P32719 Confidence 65.00% Date Thu Jan 5 11:50:42 GMT 2012 Rank 494 Aligned Residues 170 % Identity 19% Template d1pv8a_ SCOP info TIM beta/alpha-barrel Aldolase 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.										70	.	.	.
Predicted Secondary structure																				.																																	.																.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																	.																.	.	.	.	.	.	.	.	.
Query Sequence		P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	.	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	.	.	.	.	.	.	.	.	.	Q	D	Y	I
Query Conservation																				.																																	.																.	.	.	.	.	.	.	.	.
Alig confidence																				.												.	.	.	.	.																	.																.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		P	G	V	A	R	Y	G	V	K	R	L	E	E	M	L	R	P	L	V	E	E	G	L	R	C	V	L	I	F	G	.	.	.	.	.	V	P	E	E	S	P	A	I	E	A	I	H	L	L	R	K	T	F	P	N	L	L	V	A	C	D	V	C	L	C	A	F	R	A	E	E	S	R	Q	R	L	A	E	V	A
Template Known Secondary structure		T	T																				T									.	.	.	.	.					S													S	T	T	S
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.																			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.
Predicted Secondary structure																																					.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																					.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	.	.	V	G	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	.	D	K	I
Query Conservation																																					.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence														.	.				.																		.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation														.	.				.
Template Sequence		L	A	Y	A	K	A	G	C	Q	V	V	A	.	.	P	S	D	.	D	G	R	V	E	A	I	K	E	A	L	M	A	H	G	L	G	N	R	V	S	V	M	S	Y	S	A	K	F	A	S	C	F	Y	G	P	F	R	D	A	A	L	P	P	G	A	R	G	L	A	L	R	A	V	D	R	D	V	R	E	G	A
Template Known Secondary structure								T		S				.	.				.														T	T		T	T	T				B									G	G	G										T	T															T	T
Template Predicted Secondary structure														.	.				.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.			.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Query Sequence		T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	S	C	N	.	.	.	.	.	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.											.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.											.	.	.	.
Template Sequence		D	M	L	M	V	K	P	G	M	P	Y	.	.	.	.	.	.	.	L	D	I	V	R	E	V	K	D	K	.	.	.	.	H	P	D	L	P	L	A	V	Y	H	V	S	G	E	F	A	M	L	W	H	G	A	Q	A	G	A	F	D	L	K	A	A	V	L	E	A	M	T	A	F	R	R	A	G	A	D	I	I
Template Known Secondary structure		S	B					S		G	G	G	.	.	.	.	.	.	.											.	.	.	.	S	T	T	S																				T	T	S	S																	T		S
Template Predicted Secondary structure													.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		193
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		316

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions