|   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
90 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 100 | . | . | . | . | |
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
Query Sequence |   |
I | A | Q | L | A | R | A | G | A | D | F | I | T | L | H | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | I | N | G | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | F | R | L | I | D | E | I | R | R | . |
. |
. |
H | D | M | K | V | G | L | I | L | N | P | E | T | . |
. |
. |
. |
. |
. |
P |
Query Conservation |   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|
|   |
| . | . | . | . | . | . | . | . | . |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   | . | . | . |   |
|   |
|   |   |
|   |
|   |
|   |
| . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
Template Conservation |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
A | Q | L | A | R | E | A | G | Y | D | G | V | E | V | M | G | S | E | G | Y | L | I | N | E | F | L | T | L | R | T | N | Q | R | S | D | Q | W | G | G | D | Y | R | N | R | M | R | F | A | V | E | V | V | R | A | V | R | E | R | V | G | N | D | F | I | I | I | Y | R | L | S | M | L | D | L | V | E | D | G | G | T |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| B | T | S |  |  |  |  |  |  |
| T | T | T |
|
|
|
| S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |
|
| S | T | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
|
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
. | 190 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Query Sequence |   |
V | E | A | M | K | Y | Y | I | H | K | A | D | . |
. |
K | I | T | V | M | T | V | D | P | G | F | A | G | Q | P | F | I | P | E | M | L | D | . |
. |
. |
. |
K | L | A | E | L | K | A | W | R | E | R | E | G | L | E | Y | E | I | E | V | D | G | S | C | N | Q | A | T | Y | E | K | L | M | A | A | G | . |
A | D | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
| . | . |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |
| . |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |
|
|   |
Template Sequence |   |
F | A | E | T | V | E | L | A | Q | A | I | E | A | A | G | A | T | I | I | N | T | G | I | G | W | H | E | A | R | I | P | T | I | A | T | P | V | P | R | G | A | F | S | W | V | T | R | K | L | K | G | H | V | S | L | P | L | V | T | T | N | R | I | N | D | P | Q | V | A | D | D | I | L | S | R | G | D | A | D | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| B | T | T |
| S | S |
| S | S | S | T | T | S |
| T | T | T | T |  |  |  |  |  |  |  | T | T | S |
| S | S |
|  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
  |
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | I | V | G | T | S | G | L | F | N | H | A | E | N | I | D | E | A | W | R | I |
Query Conservation |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
| . | . |
|
|
|   |
|   |   |
|   |   |   |
Template Sequence |   |
V | S | M | A | R | P | F | L | . |
. |
A | D | A | E | L | L | S | K | A | Q | S |
Template Known Secondary structure |   |
 |  |  | S | T |  |  |  | . | . |  |
| T | T |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  | . | . |  |
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
307 | . | . | 310 | . | . | . | . | |
|
. | . | . | . | . | 320 | . | . | . | . | . |
  |